P55380 (Y4BM_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA

Gene names

Ordered Locus Names:	NGR_a00170
ORF Names:	y4bM
AND
Ordered Locus Names:	NGR_a02870
ORF Names:	y4kI
AND
Ordered Locus Names:	NGR_a01570
ORF Names:	y4tA

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	263 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the IS21/IS1162 putative ATP-binding protein family.

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Technical term	Complete proteome Plasmid Transposable element
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 263	263	Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA		PRO_0000075482
Regions
	Nucleotide binding	112 – 119	8	ATP Potential

Sequences

	Sequence		Length	Mass (Da)
	P55380 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 756836C342DC955E	FASTA	263	29,607
	10 20 30 40 50 60 MKEARMLTNP TLDQMQALGL TGMAAAWREL TEQSGTNELS RDEWLGLMLD REVTLRADKR 70 80 90 100 110 120 IRNRLASAKL RFAQACIEDI DFAAARGLDR RNTMALAQGQ WLTAHEGLII TGHTGTGKSW 130 140 150 160 170 180 LACAFGRQAA RLGHSVLYVR VPRMFEELAL ARLDGSFPRL IDRLTRVQLL ILDDFGTHTL 190 200 210 220 230 240 SDQQRFHLFE IVEERYQRKS TLITAQVPVA SWHDLIADST VADAILDRIV HNAHRITLRG 250 260 ESMRKQKSAP LLTGAENGEI NQP

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91628.1. U00090 Genomic DNA. Translation: AAB91740.1. U00090 Genomic DNA. Translation: AAB91855.1.
RefSeq	NP_443790.1. NC_000914.2. NP_443938.1. NC_000914.2. NP_444068.1. NC_000914.2. YP_002822317.1. NC_012586.1. YP_002823143.1. NC_012586.1. YP_002823694.1. NC_012586.1.
3D structure databases
ProteinModelPortal	P55380.
ModBase	Search...
Protein-protein interaction databases
STRING	P55380.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7788038. 7788673. 7789634. 962262. 962344. 962441.
GenomeReviews	Gene locus NGR_a00170 in contig U00090_GR. Gene locus NGR_a01570 in contig U00090_GR. Gene locus NGR_a02870 in contig U00090_GR.
KEGG	rhi:NGR_a00170. rhi:NGR_a01570. rhi:NGR_a02870.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG695266.
OMA	TWIACAF.
ProtClustDB	CLSK893848.
Family and domain databases
InterPro	IPR003593. ATPase_AAA+_core. IPR002611. IstB_ATP-bd. IPR013690. IstB_N. [Graphical view]
Pfam	PF01695. IstB_IS21. 1 hit. PF08483. IstB_IS21_ATP. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4BM_RHISN

Accession

Primary (citable) accession number: P55380

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	September 21, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program