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Reviewed, UniProtKB/Swiss-Prot P55380 (Y4BM_RHISN)

Last modified December 15, 2009. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA
Gene names
Ordered Locus Names: NGR_a00170
ORF Names: y4bM
AND
Ordered Locus Names: NGR_a02870
ORF Names: y4kI
AND
Ordered Locus Names: NGR_a01570
ORF Names: y4tA
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length263 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the IS21/IS1162 putative ATP-binding protein family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 263263Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA
PRO_0000075482

Regions

Nucleotide binding112 – 1198ATP Potential

Sequences

Sequence LengthMass (Da)Tools
P55380-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 756836C342DC955E

FASTA26329,607
        10         20         30         40         50         60 
MKEARMLTNP TLDQMQALGL TGMAAAWREL TEQSGTNELS RDEWLGLMLD REVTLRADKR 

        70         80         90        100        110        120 
IRNRLASAKL RFAQACIEDI DFAAARGLDR RNTMALAQGQ WLTAHEGLII TGHTGTGKSW 

       130        140        150        160        170        180 
LACAFGRQAA RLGHSVLYVR VPRMFEELAL ARLDGSFPRL IDRLTRVQLL ILDDFGTHTL 

       190        200        210        220        230        240 
SDQQRFHLFE IVEERYQRKS TLITAQVPVA SWHDLIADST VADAILDRIV HNAHRITLRG 

       250        260 
ESMRKQKSAP LLTGAENGEI NQP 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

U00090 Genomic DNA. Translation: AAB91628.1.
U00090 Genomic DNA. Translation: AAB91740.1.
U00090 Genomic DNA. Translation: AAB91855.1.
RefSeqNP_443790.1.
NP_443938.1.
NP_444068.1.
YP_002822317.1.
YP_002823143.1.
YP_002823694.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID7788038.
7788673.
7789634.
962262.
962344.
962441.
GenomeReviewsGene locus NGR_a00170 in contig U00090_GR.
Gene locus NGR_a01570 in contig U00090_GR.
Gene locus NGR_a02870 in contig U00090_GR.
KEGGrhi:NGR_a00170.
rhi:NGR_a01570.
rhi:NGR_a02870.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695266.

Family and domain databases

InterProIPR003593. ATPase_AAA+_core.
IPR002611. IstB_ATP_bd.
IPR013690. IstB_N.
[Graphical view]
PfamPF01695. IstB. 1 hit.
PF08483. IstB_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4BM_RHISN
AccessionPrimary (citable) accession number: P55380
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: December 15, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents