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Reviewed, UniProtKB/Swiss-Prot P55370 (Y4BC_RHISN)

Last modified November 24, 2009. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein y4bC/y4pJ
Gene names
Ordered Locus Names: NGR_a00260
ORF Names: y4bC
AND
Ordered Locus Names: NGR_a02020
ORF Names: y4pJ
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length149 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

General annotation (Comments)

Sequence similarities

To Rhizobium NGR234A y4oM.

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 149149Uncharacterized protein y4bC/y4pJ
PRO_0000200805

Sequences

Sequence LengthMass (Da)Tools
P55370-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: F1AD57685E1BEDCB

FASTA14916,836
        10         20         30         40         50         60 
MPNETKRERL RELGALNARP EAVRAPWFRE STFFDPLDLV QVKYEMLRHV QEDGVNKADA 

        70         80         90        100        110        120 
AALFGLSRPT YYQAEAAFER DGIAGLLPRT RGPKSAHKLT DEVMQLIEQN QHAGAPLQAR 

       130        140 
SLAELLHSTL GISVHPRSIE RAIARKKKR 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

U00090 Genomic DNA. Translation: AAB91619.1.
U00090 Genomic DNA. Translation: AAB91820.1.
RefSeqNP_443781.1.
NP_444023.1.
YP_002822312.1.
YP_002822374.1.
YP_002823202.1.
YP_002823712.1.
YP_002823882.1.
YP_002826118.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID7788056.
7788735.
7789001.
7789628.
7789693.
7793471.
962259.
962581.
GenomeReviewsGene locus NGR_a00260 in contig U00090_GR.
Gene locus NGR_a02020 in contig U00090_GR.

Organism-specific databases

CMRSearch...

Family and domain databases

InterProIPR009057. Homeodomain-like.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4BC_RHISN
AccessionPrimary (citable) accession number: P55370
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 24, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents