Reviewed, UniProtKB/Swiss-Prot P55368 (Y4BA_RHISN)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein y4bA/y4pH

Gene names

Ordered Locus Names:	NGR_a00280
ORF Names:	y4bA
AND
Ordered Locus Names:	NGR_a02040
ORF Names:	y4pH

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	694 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Subcellular location	Membrane; Single-pass membrane protein Potential.
Sequence similarities	Contains 1 recombinase domain.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro recombinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 694	694	Uncharacterized protein y4bA/y4pH		PRO_0000200804
Regions
	Transmembrane	386 – 406	21	Potential
	Domain	192 – 313	122	Recombinase

Sequences

	Sequence		Length	Mass (Da)
	P55368-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 26242F62AA6C54DD	FASTA	694	78,743
	10 20 30 40 50 60 MSTDIAIKVD ADHLRRDAFL YVRQSSLRQV FENTESTKRQ YALRDRAVAL GWPIERVHVI 70 80 90 100 110 120 DSDLGLSGAQ SQDRDGFQHL VSEVAMGHAG IVLGLEVSRL ARNNADWHRL LELAALSRTL 130 140 150 160 170 180 IMDEDGVYDP AYFNDRMLLG LKGTMSEAEL HILKSRLQGG ILNKARRGEL EMPLPIGLVY 190 200 210 220 230 240 TPDARVVLDP DRQIQDTVRL LFDTFRQTGS ACAVVRRLRG EKILFPRRIR RGIGKGDVLW 250 260 270 280 290 300 NEIDHSRVLQ ILHNPRYAGA FAYGRTRTAY NAKLKPVQLR VARSDWQVLI PDAHDGYISW 310 320 330 340 350 360 AEYERNQAAL EQNATGFSPG LRGRMPRQGS GLLQGRLLCG RCGARMRVHY EPFEGRLRPY 370 380 390 400 410 420 YVCNEAVVRH AGKHCQWVRG APVDEAVSAL LLEVMAPAAI DVALAVQQEI TQRVEQAAAL 430 440 450 460 470 480 RGTQLQRARY EAELARRRYL KVDPDNRLVA DALEADWNAR LRDLDALQRE HERQNEADHS 490 500 510 520 530 540 LLDEPAQQRI RALTADFPRI WNDERTGAVE RKRMLGLLIE DVTLLVDDEV NINIRWRGGR 550 560 570 580 590 600 TQSLSVARPR PMSVIRKTPA QVVALINELL EATNDRQIAA RLNELGHRNW RGEPFTPKKV 610 620 630 640 650 660 MLVRRTYGLK SRYERLREGG MLTGEEVAQQ LGVCESTVHQ LGRKGTLKRH RYASNHRYLY 670 680 690 EPPGNVRLEK GAGSRYGGRQ PRLIVAQPLQ QGAS

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00090 Genomic DNA. Translation: AAB91617.1. U00090 Genomic DNA. Translation: AAB91818.1.
RefSeq	NP_443779.1. NP_444021.1. YP_002822313.1. YP_002822373.1. YP_002823138.1. YP_002823201.1. YP_002823713.1. YP_002823883.1. YP_002826119.1. YP_002826760.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	7788057. 7788668. 7788734. 7789002. 7789629. 7789692. 7791523. 7793472. 962392. 962634.
GenomeReviews	Gene locus NGR_a00280 in contig U00090_GR. Gene locus NGR_a02040 in contig U00090_GR.
Organism-specific databases
CMR	Search...
Family and domain databases
InterPro	IPR011109. Recombinase. IPR006119. Resolv_N. [Graphical view]
Gene3D	G3DSA:3.40.50.1390. Resolv_N. 1 hit.
Pfam	PF07508. Recombinase. 1 hit. PF00239. Resolvase. 1 hit. [Graphical view]
SMART	SM00857. Resolvase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4BA_RHISN

Accession

Primary (citable) accession number: P55368

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	November 24, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)