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Reviewed, UniProtKB/Swiss-Prot P55364 (Y4AQ_RHISN)

Last modified December 15, 2009. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein y4aQ
Gene names
Ordered Locus Names: NGR_a00310
ORF Names: y4aQ
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the transposase 25 family.

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 188188Uncharacterized protein y4aQ
PRO_0000200801

Sequences

Sequence LengthMass (Da)Tools
P55364-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: BEF6367CAB9DA3F8

FASTA18820,421
        10         20         30         40         50         60 
MSRIILSLDA ENADLKARVA FLEQQLFGPK SEKMTAIDPT QATLDLGDLT DIPAAANDDV 

        70         80         90        100        110        120 
APVAEGPKQE RRSPSRNIGR LPRHLPRYEE LIEPESKICP CCSFELHCVG TDVSEALDIV 

       130        140        150        160        170        180 
PAVVRVKQTI RPSYACRAGE SVIVQAPASA RVMGESNVAP MRLAFCLAHA RRKFVDVVKL 


TGSSEAGR 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

U00090 Genomic DNA. Translation: AAB91614.1.
RefSeqNP_443776.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID962257.
GenomeReviewsGene locus NGR_a00310 in contig U00090_GR.
KEGGrhi:NGR_a00310.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG741435.

Family and domain databases

InterProIPR004291. Transposase_25.
[Graphical view]
PfamPF03050. Transposase_25. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4AQ_RHISN
AccessionPrimary (citable) accession number: P55364
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: December 15, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents