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Protein

Nodulation protein Z

Gene

nodZ

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP-fucose as the donor group.

GO - Molecular functioni

  1. transferase activity, transferring hexosyl groups Source: InterPro

GO - Biological processi

  1. nodulation Source: UniProtKB-KW
  2. oligosaccharide biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Nodulation

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6091-MONOMER.

Protein family/group databases

CAZyiGT23. Glycosyltransferase Family 23.

Names & Taxonomyi

Protein namesi
Recommended name:
Nodulation protein Z (EC:2.4.1.-)
Gene namesi
Name:nodZ
Ordered Locus Names:NGR_a00400
ORF Names:y4aH
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 322322Nodulation protein ZPRO_0000096919Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a00400.

Structurei

3D structure databases

ProteinModelPortaliP55355.
SMRiP55355. Positions 4-314.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 314314GT23PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyltransferase 23 family.PROSITE-ProRule annotation
Contains 1 GT23 domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG330406.
HOGENOMiHOG000113818.
OMAiGDCLWSL.
OrthoDBiEOG6K3ZZK.

Family and domain databases

InterProiIPR027350. GT23_dom.
IPR008716. NodZ.
[Graphical view]
PfamiPF05830. NodZ. 1 hit.
[Graphical view]
PIRSFiPIRSF020513. 6alphaFUT_NodZ. 1 hit.
PROSITEiPS51659. GT23. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55355-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYNRYVLSRR RTGFGDCLWS LAAAWRYAQR TARTLAVDWR GSCYLDQPFT
60 70 80 90 100
NAFPVFFEPI KDIAGVPFIC DNRVNEFSFP GPFFPNWWNK PAIECVYRPD
110 120 130 140 150
AQVFRERDEL DELFQAQDDV EANTVVCDAC LMWRCDEEAE RQIFCSVKPR
160 170 180 190 200
AEIQARIDAI YQEHFYGYSA IGVHVRHGNG EDVMDHAPYW ADPDLAVHQV
210 220 230 240 250
CTAINAAKAL PHPKPVRVIL CTDSARVLDQ VSSRFPDLLT IPKSFRADQS
260 270 280 290 300
GPLHSADLGV EGGISALVEM YLLGLCDTVI RFPPTSAFTR YARLSVPRVI
310 320
EFDLNDPSRL VVIERSSTNT AS
Length:322
Mass (Da):36,523
Last modified:November 1, 1997 - v1
Checksum:i07800CF24CFCFB7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91605.1.
RefSeqiNP_443767.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91605; AAB91605; NGR_a00400.
GeneIDi962295.
KEGGirhi:NGR_a00400.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91605.1.
RefSeqiNP_443767.1. NC_000914.2.

3D structure databases

ProteinModelPortaliP55355.
SMRiP55355. Positions 4-314.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi394.NGR_a00400.

Protein family/group databases

CAZyiGT23. Glycosyltransferase Family 23.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91605; AAB91605; NGR_a00400.
GeneIDi962295.
KEGGirhi:NGR_a00400.

Phylogenomic databases

eggNOGiNOG330406.
HOGENOMiHOG000113818.
OMAiGDCLWSL.
OrthoDBiEOG6K3ZZK.

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6091-MONOMER.

Family and domain databases

InterProiIPR027350. GT23_dom.
IPR008716. NodZ.
[Graphical view]
PfamiPF05830. NodZ. 1 hit.
[Graphical view]
PIRSFiPIRSF020513. 6alphaFUT_NodZ. 1 hit.
PROSITEiPS51659. GT23. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiNODZ_RHISN
AccessioniPrimary (citable) accession number: P55355
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: February 4, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.