Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P55355 (NODZ_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nodulation protein Z

EC=2.4.1.-
Gene names
Name:nodZ
Ordered Locus Names:NGR_a00400
ORF Names:y4aH
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length322 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP-fucose as the donor group.

Sequence similarities

Belongs to the glycosyltransferase 23 family.

Contains 1 GT23 domain.

Ontologies

Keywords
   Biological processNodulation
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processnodulation

Inferred from electronic annotation. Source: UniProtKB-KW

oligosaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 322322Nodulation protein Z
PRO_0000096919

Regions

Domain1 – 314314GT23

Sequences

Sequence LengthMass (Da)Tools
P55355 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 07800CF24CFCFB7B

FASTA32236,523
        10         20         30         40         50         60 
MYNRYVLSRR RTGFGDCLWS LAAAWRYAQR TARTLAVDWR GSCYLDQPFT NAFPVFFEPI 

        70         80         90        100        110        120 
KDIAGVPFIC DNRVNEFSFP GPFFPNWWNK PAIECVYRPD AQVFRERDEL DELFQAQDDV 

       130        140        150        160        170        180 
EANTVVCDAC LMWRCDEEAE RQIFCSVKPR AEIQARIDAI YQEHFYGYSA IGVHVRHGNG 

       190        200        210        220        230        240 
EDVMDHAPYW ADPDLAVHQV CTAINAAKAL PHPKPVRVIL CTDSARVLDQ VSSRFPDLLT 

       250        260        270        280        290        300 
IPKSFRADQS GPLHSADLGV EGGISALVEM YLLGLCDTVI RFPPTSAFTR YARLSVPRVI 

       310        320 
EFDLNDPSRL VVIERSSTNT AS 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91605.1.
RefSeqNP_443767.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55355.
SMRP55355. Positions 4-314.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a00400.

Protein family/group databases

CAZyGT23. Glycosyltransferase Family 23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91605; AAB91605; NGR_a00400.
GeneID962295.
KEGGrhi:NGR_a00400.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG330406.
HOGENOMHOG000113818.
OMAGDCLWSL.
OrthoDBEOG6K3ZZK.
ProtClustDBCLSK864398.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6091-MONOMER.

Family and domain databases

InterProIPR027350. GT23_dom.
IPR008716. NodZ.
[Graphical view]
PfamPF05830. NodZ. 1 hit.
[Graphical view]
PIRSFPIRSF020513. 6alphaFUT_NodZ. 1 hit.
PROSITEPS51659. GT23. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameNODZ_RHISN
AccessionPrimary (citable) accession number: P55355
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 13, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names