P55353 (Y4AF_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein y4aF

Gene names

Ordered Locus Names:	NGR_a00420
ORF Names:	y4aF

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	314 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Putative nucleotide sugar epimerase/dehydrogenase.
Cofactor	NAD or NADP.
Sequence similarities	Belongs to the fucose synthase family.

Ontologies

Keywords
Biological process	Nodulation
Ligand	NAD
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological_process	cellular metabolic process Inferred from electronic annotation. Source: InterPro nodulation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro coenzyme binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 314	314	Uncharacterized protein y4aF		PRO_0000174360

Sequences

	Sequence		Length	Mass (Da)
	P55353 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 2E571D298AA98110	FASTA	314	34,674
	10 20 30 40 50 60 MPMYLLDGKR IWVAGHKGMV GSAIIRSLAS EDCEVIVADR QKLDLTRQEE VEKFLLKEKP 70 80 90 100 110 120 HAVIMAAAKV GGILANDTMP ADFIYQNLIM EANVIEGSFR SGVEKLLFLG SSCIYPKYAA 130 140 150 160 170 180 QPIREEALLT GPLEPTNEWY AIAKIAGIKL CQAYRKQYGA NFISAMPTNL YGPRDKFDLN 190 200 210 220 230 240 SSHVVPALIR KAHEAKIKDL GCLSIWGSGT PTRDFLYSED CSDALVFLLK HYSETEHINI 250 260 270 280 290 300 GSGGEISIIE LAHIVCRVVG FKGDIVFDTS KPDGTPRKLL SSERLVSMGW RPKTSLELGL 310 AKSYESFVSN VADN

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91603.1.
RefSeq	NP_443765.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55353.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a00420.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91603; AAB91603; NGR_a00420.
GeneID	962636.
KEGG	rhi:NGR_a00420.
PATRIC	32300807. VBIRhiSp122450_0039.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0451.
HOGENOM	HOG000168011.
KO	K02377.
OMA	DFISAMP.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR001509. Epimerase_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4AF_RHISN

Accession

Primary (citable) accession number: P55353

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program