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P55351

- Y4AD_RHISN

UniProt

P55351 - Y4AD_RHISN

Protein

Uncharacterized protein y4aD

Gene

NGR_a00430

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound.

    GO - Molecular functioni

    1. transferase activity Source: InterPro

    GO - Biological processi

    1. isoprenoid biosynthetic process Source: UniProtKB-KW

    Keywords - Biological processi

    Isoprene biosynthesis

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6094-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4aD
    Gene namesi
    Ordered Locus Names:NGR_a00430
    ORF Names:y4aD
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 292292Uncharacterized protein y4aDPRO_0000200798Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a00430.

    Structurei

    3D structure databases

    ProteinModelPortaliP55351.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the phytoene/squalene synthase family.Curated

    Phylogenomic databases

    eggNOGiCOG1562.
    HOGENOMiHOG000003801.
    OMAiYENWDEV.
    OrthoDBiEOG63FW00.

    Family and domain databases

    Gene3Di1.10.600.10. 1 hit.
    InterProiIPR002060. Squ/phyt_synthse.
    IPR017827. Squalene_synthase_HpnC.
    IPR008949. Terpenoid_synth.
    [Graphical view]
    PfamiPF00494. SQS_PSY. 1 hit.
    [Graphical view]
    SUPFAMiSSF48576. SSF48576. 1 hit.
    TIGRFAMsiTIGR03464. HpnC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55351-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSGSGPRSD AMHREKNFPV ASWIIHPRHR ALILAFYRFV RMADDIADHA    50
    TLAPDEKLLY LDLLEAELLG KGETRAEAVH LRTALDRRGM PPRHALDLLT 100
    AFRMDVTKQR YENWDEVIDY CRYSAMPVGR FVLDVHGESA ATWPASDVLC 150
    AGLQVCNHLQ DCGKDFLNLN RVYIPRDALS ASGASIEELG AAKSSLQMLQ 200
    CLRSLAAKAE VLLNGGGALV SQVKDFRLRF EVSVILSFAD KIVSMLKMRD 250
    PLRERVHLSP LELLLHGVGA MANEAARRAF GRGTRFKTTV DV 292
    Length:292
    Mass (Da):32,540
    Last modified:November 1, 1997 - v1
    Checksum:i1055E5E7F3614379
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91602.1.
    RefSeqiNP_443764.1. NC_000914.2.
    WP_010875085.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91602; AAB91602; NGR_a00430.
    GeneIDi962253.
    KEGGirhi:NGR_a00430.
    PATRICi32300809. VBIRhiSp122450_0040.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91602.1 .
    RefSeqi NP_443764.1. NC_000914.2.
    WP_010875085.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55351.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a00430.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91602 ; AAB91602 ; NGR_a00430 .
    GeneIDi 962253.
    KEGGi rhi:NGR_a00430.
    PATRICi 32300809. VBIRhiSp122450_0040.

    Phylogenomic databases

    eggNOGi COG1562.
    HOGENOMi HOG000003801.
    OMAi YENWDEV.
    OrthoDBi EOG63FW00.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6094-MONOMER.

    Family and domain databases

    Gene3Di 1.10.600.10. 1 hit.
    InterProi IPR002060. Squ/phyt_synthse.
    IPR017827. Squalene_synthase_HpnC.
    IPR008949. Terpenoid_synth.
    [Graphical view ]
    Pfami PF00494. SQS_PSY. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48576. SSF48576. 1 hit.
    TIGRFAMsi TIGR03464. HpnC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4AD_RHISN
    AccessioniPrimary (citable) accession number: P55351
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3