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P55351

- Y4AD_RHISN

UniProt

P55351 - Y4AD_RHISN

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Protein
Uncharacterized protein y4aD
Gene
NGR_a00430, y4aD
Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound.

GO - Molecular functioni

  1. transferase activity Source: InterPro

GO - Biological processi

  1. isoprenoid biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Isoprene biosynthesis

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6094-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4aD
Gene namesi
Ordered Locus Names:NGR_a00430
ORF Names:y4aD
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 292292Uncharacterized protein y4aD
PRO_0000200798Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a00430.

Structurei

3D structure databases

ProteinModelPortaliP55351.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1562.
HOGENOMiHOG000003801.
OMAiYENWDEV.
OrthoDBiEOG63FW00.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR002060. Squ/phyt_synthse.
IPR017827. Squalene_synthase_HpnC.
IPR008949. Terpenoid_synth.
[Graphical view]
PfamiPF00494. SQS_PSY. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
TIGRFAMsiTIGR03464. HpnC. 1 hit.

Sequencei

Sequence statusi: Complete.

P55351-1 [UniParc]FASTAAdd to Basket

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MTSGSGPRSD AMHREKNFPV ASWIIHPRHR ALILAFYRFV RMADDIADHA    50
TLAPDEKLLY LDLLEAELLG KGETRAEAVH LRTALDRRGM PPRHALDLLT 100
AFRMDVTKQR YENWDEVIDY CRYSAMPVGR FVLDVHGESA ATWPASDVLC 150
AGLQVCNHLQ DCGKDFLNLN RVYIPRDALS ASGASIEELG AAKSSLQMLQ 200
CLRSLAAKAE VLLNGGGALV SQVKDFRLRF EVSVILSFAD KIVSMLKMRD 250
PLRERVHLSP LELLLHGVGA MANEAARRAF GRGTRFKTTV DV 292
Length:292
Mass (Da):32,540
Last modified:November 1, 1997 - v1
Checksum:i1055E5E7F3614379
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91602.1.
RefSeqiNP_443764.1. NC_000914.2.
WP_010875085.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91602; AAB91602; NGR_a00430.
GeneIDi962253.
KEGGirhi:NGR_a00430.
PATRICi32300809. VBIRhiSp122450_0040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91602.1 .
RefSeqi NP_443764.1. NC_000914.2.
WP_010875085.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55351.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a00430.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91602 ; AAB91602 ; NGR_a00430 .
GeneIDi 962253.
KEGGi rhi:NGR_a00430.
PATRICi 32300809. VBIRhiSp122450_0040.

Phylogenomic databases

eggNOGi COG1562.
HOGENOMi HOG000003801.
OMAi YENWDEV.
OrthoDBi EOG63FW00.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6094-MONOMER.

Family and domain databases

Gene3Di 1.10.600.10. 1 hit.
InterProi IPR002060. Squ/phyt_synthse.
IPR017827. Squalene_synthase_HpnC.
IPR008949. Terpenoid_synth.
[Graphical view ]
Pfami PF00494. SQS_PSY. 1 hit.
[Graphical view ]
SUPFAMi SSF48576. SSF48576. 1 hit.
TIGRFAMsi TIGR03464. HpnC. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4AD_RHISN
AccessioniPrimary (citable) accession number: P55351
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 3, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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