Reviewed,
UniProtKB/Swiss-Prot P55349 (Y4AB_RHISN)
Last modified
November 24, 2009.
Version 43.
History...
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90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Uncharacterized protein y4aB | ||||
| Gene names |
| ||||
| Encoded on | Plasmid sym pNGR234a | ||||
| Organism | Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 394 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium |
Protein attributes
| Sequence length | 417 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Predicted. |
General annotation (Comments)
| Function | Possible flavoprotein oxidoreductase. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound. |
| Cofactor | FAD Potential. |
| Sequence similarities | To phytoene dehydrogenase and to amine oxidase. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Isoprene biosynthesis |
| Ligand | FAD Flavoprotein |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome Plasmid |
| Gene Ontology (GO) | |
| Biological process | isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| [1] | "Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| U00090 Genomic DNA. Translation: AAB91600.1. | |
| RefSeq | NP_443762.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 962178. |
| GenomeReviews | Gene locus NGR_a00450 in contig U00090_GR. |
Organism-specific databases | |
| CMR | Search... |
Family and domain databases | |
| InterPro | IPR002937. Amino_oxidase. IPR003042. Rng_hydrolase-like. IPR017830. Squal-assoc_FAD-dep_deSatase. [Graphical view] |
| Pfam | PF01593. Amino_oxidase. 1 hit. [Graphical view] |
| PRINTS | PR00420. RNGMNOXGNASE. |
| TIGRFAMs | TIGR03467. HpnE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Y4AB_RHISN | ||||||||
| Accession | Primary (citable) accession number: P55349 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Rhizobium plasmid pNGR234a Rhizobium plasmid pNGR234a: entries and gene names |

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