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P55349 (Y4AB_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein y4aB
Gene names
Ordered Locus Names:NGR_a00450
ORF Names:y4aB
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length417 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Function

Possible flavoprotein oxidoreductase. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound.

Cofactor

FAD Potential.

Sequence similarities

To phytoene dehydrogenase and to amine oxidase.

Ontologies

Keywords
   Biological processIsoprene biosynthesis
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological processisoprenoid biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

oxidoreductase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 417417Uncharacterized protein y4aB
PRO_0000200797

Regions

Nucleotide binding7 – 1913FAD Potential

Sequences

Sequence LengthMass (Da)Tools
P55349 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: E4522F97C6B53C60

FASTA41744,583
        10         20         30         40         50         60 
MPKNVHIIGA GISGLSAAVQ LSNAGLPVHV YEATQQAGGR CRSFFDSATN LTIDNGNHLV 

        70         80         90        100        110        120 
LSGNQYVRNY ARAIGTESGL VGPTSAKFPF VDISTVQRWQ VDLGGGRLPT WVFHKARRVP 

       130        140        150        160        170        180 
DTRLWDYLKL APILWAGADE LVGNTIPCNG TLYRRLVRPL LLAALNCDPP EGSAGLAGAI 

       190        200        210        220        230        240 
VRETLLAGGE ACRPLVARDG LSAVLVEPAV KLLERRGATV RLSHKLRKLA KSAEIISELD 

       250        260        270        280        290        300 
FGDDKIAVGP DDAVILAVPP RAAATLLPGL KTPTEFRAVV NAHFRFDPPV GADPILGVVG 

       310        320        330        340        350        360 
GLVEWLFAYP QRLSVTISNG DRLLDIPREE VVRVIWRDVC EAGGISGELP PWQIVCERRA 

       370        380        390        400        410 
TFQATPEQNA LRPGPVTGCK NLFLAGDWTA TGLPATIEGS VRSGNRAADL ALSETNT 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91600.1.
RefSeqNP_443762.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55349.
ModBaseSearch...

Protein-protein interaction databases

STRINGP55349.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID962178.
GenomeReviewsGene locus NGR_a00450 in contig U00090_GR.
KEGGrhi:NGR_a00450.
PATRIC32300813. VBIRhiSp122450_0042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG296417.
OMAQAGGRCR.
ProtClustDBCLSK893843.

Family and domain databases

InterProIPR002937. Amino_oxidase.
IPR016040. NAD(P)-bd_dom.
IPR003042. Rng_hydrolase-like.
IPR017830. Squal-assoc_FAD-dep_deSatase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PfamPF01593. Amino_oxidase. 1 hit.
[Graphical view]
PRINTSPR00420. RNGMNOXGNASE.
TIGRFAMsTIGR03467. HpnE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4AB_RHISN
AccessionPrimary (citable) accession number: P55349
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: January 25, 2012
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names