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Protein

Uncharacterized HTH-type transcriptional regulator YxjO

Gene

yxjO

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU38880-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YxjO
Gene namesi
Name:yxjO
Ordered Locus Names:BSU38880
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058251 – 291Uncharacterized HTH-type transcriptional regulator YxjOAdd BLAST291

Proteomic databases

PaxDbiP55181.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100020981.

Structurei

3D structure databases

ProteinModelPortaliP55181.
SMRiP55181.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4108WAV. Bacteria.
COG0583. LUCA.
HOGENOMiHOG000008824.
InParanoidiP55181.
OMAiGSEYPSI.
PhylomeDBiP55181.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

P55181-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLKWLQTFI AAAESESFRE AAEHLYLTQP AVSQHMRKLE DELDMRLFLH
60 70 80 90 100
SGRRVVLTDE GRLFLPYAKE MIHVYQAGKQ KVSQWKQGYS RSLTLAVHPY
110 120 130 140 150
IASYILPRFL PAYIQKHPHV ELSTHVAGSD AIKQAVEHNE ADIGLSRKDP
160 170 180 190 200
NTNTLYYQHI CEGTLCLAAP FQESRPDAAS VLTRYRLLTH DHPSYGDAFL
210 220 230 240 250
DNIRSHYPYL QMMAVGQTDT AVHMMKAGMG ASFLPTYIIK QEEAEKKLMA
260 270 280 290
VSTPAHLELP ASQTFMMWKR NSEDIQHFHA MLHDFMQREQ V
Length:291
Mass (Da):33,430
Last modified:October 1, 1996 - v1
Checksum:i31FFF2435F587CD1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X99339 Genomic DNA. Translation: CAA67714.1.
D83026 Genomic DNA. Translation: BAA11716.1.
AL009126 Genomic DNA. Translation: CAB15914.1.
PIRiD70080.
RefSeqiNP_391767.1. NC_000964.3.
WP_003242654.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB15914; CAB15914; BSU38880.
GeneIDi937423.
KEGGibsu:BSU38880.
PATRICifig|224308.179.peg.4207.

Similar proteinsi

Entry informationi

Entry nameiYXJO_BACSU
AccessioniPrimary (citable) accession number: P55181
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: January 31, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList