P55175 (Y601_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0012 hydrolase sll0601
EC=3.5.-.-

Gene names

Ordered Locus Names:

sll0601

Organism

Synechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]

Taxonomic identifier

1111708 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis › Synechocystis sp. PCC 6803

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0012 family. Contains 1 CN hydrolase domain.

Ontologies

Keywords
Molecular function	Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 272	272	UPF0012 hydrolase sll0601		PRO_0000213262
Regions
	Domain	4 – 272	269	CN hydrolase
Sites
	Active site	43	1	Proton acceptor Potential
	Active site	115	1	By similarity
	Active site	158	1	Nucleophile By similarity

Sequences

	Sequence		Length	Mass (Da)
	P55175 [UniParc]. Last modified October 1, 1996. Version 1. Checksum: 7787BA9B2BE003A1	FASTA	272	30,191
	10 20 30 40 50 60 MKPYLAAALQ MTSRPNLTEN LQEAEELIDL AVRQGAELVG LPENFAFLGN ETEKLEQATA 70 80 90 100 110 120 IATATEKFLQ TMAQRFQVTI LAGGFPFPVA GEAGKAYNTA TLIAPNGQEL ARYHKVHLFD 130 140 150 160 170 180 VNVPDGNTYW ESATVMAGQK YPPVYHSDSF GNLGLSICYD VRFPELYRYL SRQGADVLFV 190 200 210 220 230 240 PAAFTAYTGK DHWQVLLQAR AIENTCYVIA PAQTGCHYER RHTHGHAMII DPWGVILADA 250 260 270 GEKPGLAIAE INPDRLKQVR QQMPSLQHRV FV

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome." Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S. DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27184 / PCC 6803 / N-1.

[2]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000022 Genomic DNA. Translation: BAA10370.1.
PIR	S76524.
RefSeq	NP_442300.1. NC_000911.1. YP_005652360.1. NC_017277.1. YP_007452176.1. NC_020286.1.
3D structure databases
ProteinModelPortal	P55175.
ModBase	Search...
Protein-protein interaction databases
IntAct	P55175. 2 interactions.
STRING	1148.sll0601.
Proteomic databases
PaxDb	P55175.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAA10370; BAA10370; BAA10370.
GeneID	12253580. 14617854. 953066.
KEGG	syn:sll0601. syy:SYNGTS_2407.
PATRIC	23842258. VBISynSp132158_2669.
Phylogenomic databases
eggNOG	COG0388.
OMA	GNTYRES.
ProtClustDB	CLSK893510.
Family and domain databases
Gene3D	3.60.110.10. 1 hit.
InterPro	IPR003010. C-N_Hydrolase. IPR001110. UPF0012_CS. [Graphical view]
Pfam	PF00795. CN_hydrolase. 1 hit. [Graphical view]
SUPFAM	SSF56317. Ntlse/CNhydtse. 1 hit.
PROSITE	PS50263. CN_HYDROLASE. 1 hit. PS01227. UPF0012. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y601_SYNY3

Accession

Primary (citable) accession number: P55175

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	October 1, 1996
Last modified:	May 1, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program