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P54955 (YXEP_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized hydrolase YxeP
EC=3.-.-.-
Gene names
Name:yxeP
Ordered Locus Names:BSU39470
ORF Names:LP9H
OrganismBacillus subtilis
Taxonomic identifier1423 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the peptidase M20 family.

Ontologies

Keywords
   Molecular functionHydrolase
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 380380Uncharacterized hydrolase YxeP
PRO_0000061962

Experimental info

Sequence conflict541G → A in BAA08332. Ref.1
Sequence conflict1941G → S in BAA08332. Ref.1

Secondary structure

1 ...................................................... 380
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P54955 [UniParc].

Last modified July 28, 2009. Version 2.
Checksum: F36EAC6EF01AAFD3

FASTA38041,552
        10         20         30         40         50         60 
MADKAFHTRL INMRRDLHEH PELSFQEVET TKKIRRWLEE EQIEILDVPQ LKTGVIAEIK 

        70         80         90        100        110        120 
GREDGPVIAI RADIDALPIQ EQTNLPFASK VDGTMHACGH DFHTASIIGT AMLLNQRRAE 

       130        140        150        160        170        180 
LKGTVRFIFQ PAEEIAAGAR KVLEAGVLNG VSAIFGMHNK PDLPVGTIGV KEGPLMASVD 

       190        200        210        220        230        240 
RFEIVIKGKG GHAGIPNNSI DPIAAAGQII SGLQSVVSRN ISSLQNAVVS ITRVQAGTSW 

       250        260        270        280        290        300 
NVIPDQAEME GTVRTFQKEA RQAVPEHMRR VAEGIAAGYG AQAEFKWFPY LPSVQNDGTF 

       310        320        330        340        350        360 
LNAASEAAAR LGYQTVHAEQ SPGGEDFALY QEKIPGFFVW MGTNGTEEWH HPAFTLDEEA 

       370        380 
LTVASQYFAE LAVIVLETIK

« Hide

References

« Hide 'large scale' references
[1]"Cloning and sequencing of a 23-kb region of the Bacillus subtilis genome between the iol and hut operons."
Yoshida K., Fujimyra M., Yanai N., Fujita Y.
DNA Res. 2:295-301(1995) [PubMed: 8867804] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168 / BGSC1A1.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed: 9384377] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[3]"From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later."
Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.
Microbiology 155:1758-1775(2009) [PubMed: 19383706] [Abstract]
Cited for: SEQUENCE REVISION TO 54 AND 194.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		D45912 Genomic DNA. Translation: BAA08332.1.
AL009126 Genomic DNA. Translation: CAB15983.2.
PIRB70076.
RefSeqNP_391826.2. NC_000964.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1YSJX-ray2.40A/B1-380[»]
ProteinModelPortalP54955.
SMRP54955. Positions 2-379.
ModBaseSearch...

Protein family/group databases

MEROPSM20.015.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000000082; EBBACP00000000082; EBBACG00000000082.
GeneID937572.
GenomeReviewsGene locus BSU39470 in contig AL009126_GR.
KEGGbsu:BSU39470.
NMPDRfig|224308.1.peg.3952.
PATRIC18979958. VBIBacSub10457_4141.

Organism-specific databases

GenoListBSU39470.

Phylogenomic databases

GeneTreeEBGT00070000031917.
HOGENOMHBG708500.
PhylomeDBP54955.
ProtClustDBCLSK888154.

Enzyme and pathway databases

BioCycBSUB:BSU39470-MONOMER.

Family and domain databases

InterProIPR017439. Amidohydrolase.
IPR002933. Peptidase_M20.
IPR011650. Peptidase_M20_dimer.
[Graphical view]
KOK01436.
PfamPF07687. M20_dimer. 1 hit.
PF01546. Peptidase_M20. 1 hit.
[Graphical view]
PIRSFPIRSF005962. Pept_M20D_amidohydro. 1 hit.
SUPFAMSSF55031. Peptidase_M20_dimer. 1 hit.
TIGRFAMsTIGR01891. Amidohydrolases. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYXEP_BACSU
AccessionPrimary (citable) accession number: P54955
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 28, 2009
Last modified: January 25, 2012
This is version 88 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Peptidase families

Classification of peptidase families and list of entries

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents