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Protein

Uncharacterized hydrolase YxeP

Gene

yxeP

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciBSUB:BSU39470-MONOMER.

Protein family/group databases

MEROPSiM20.015.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized hydrolase YxeP (EC:3.-.-.-)
Gene namesi
Name:yxeP
Ordered Locus Names:BSU39470
ORF Names:LP9H
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000619621 – 380Uncharacterized hydrolase YxePAdd BLAST380

Proteomic databases

PaxDbiP54955.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100021296.

Structurei

Secondary structure

1380
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 19Combined sources16
Helixi28 – 40Combined sources13
Beta strandi55 – 60Combined sources6
Beta strandi67 – 73Combined sources7
Helixi100 – 115Combined sources16
Helixi118 – 120Combined sources3
Beta strandi122 – 131Combined sources10
Turni133 – 136Combined sources4
Helixi138 – 144Combined sources7
Turni145 – 150Combined sources6
Beta strandi151 – 160Combined sources10
Beta strandi167 – 170Combined sources4
Beta strandi172 – 176Combined sources5
Beta strandi179 – 187Combined sources9
Helixi202 – 213Combined sources12
Beta strandi228 – 236Combined sources9
Beta strandi240 – 242Combined sources3
Beta strandi245 – 254Combined sources10
Helixi258 – 278Combined sources21
Beta strandi282 – 291Combined sources10
Beta strandi294 – 296Combined sources3
Helixi298 – 300Combined sources3
Helixi301 – 310Combined sources10
Beta strandi314 – 317Combined sources4
Beta strandi321 – 323Combined sources3
Helixi327 – 331Combined sources5
Beta strandi336 – 342Combined sources7
Helixi360 – 378Combined sources19

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YSJX-ray2.40A/B1-380[»]
ProteinModelPortaliP54955.
SMRiP54955.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP54955.

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase M20 family.Curated

Phylogenomic databases

eggNOGiENOG4105CH2. Bacteria.
COG1473. LUCA.
HOGENOMiHOG000241404.
InParanoidiP54955.
KOiK01436.
OMAiRRNLHEH.
PhylomeDBiP54955.

Family and domain databases

CDDicd05669. M20_Acy1_YxeP_like. 1 hit.
Gene3Di3.30.70.360. 1 hit.
InterProiIPR017439. Amidohydrolase.
IPR002933. Peptidase_M20.
IPR011650. Peptidase_M20_dimer.
IPR033846. YxeP.
[Graphical view]
PfamiPF07687. M20_dimer. 1 hit.
PF01546. Peptidase_M20. 1 hit.
[Graphical view]
PIRSFiPIRSF005962. Pept_M20D_amidohydro. 1 hit.
SUPFAMiSSF55031. SSF55031. 1 hit.
TIGRFAMsiTIGR01891. amidohydrolases. 1 hit.

Sequencei

Sequence statusi: Complete.

P54955-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADKAFHTRL INMRRDLHEH PELSFQEVET TKKIRRWLEE EQIEILDVPQ
60 70 80 90 100
LKTGVIAEIK GREDGPVIAI RADIDALPIQ EQTNLPFASK VDGTMHACGH
110 120 130 140 150
DFHTASIIGT AMLLNQRRAE LKGTVRFIFQ PAEEIAAGAR KVLEAGVLNG
160 170 180 190 200
VSAIFGMHNK PDLPVGTIGV KEGPLMASVD RFEIVIKGKG GHAGIPNNSI
210 220 230 240 250
DPIAAAGQII SGLQSVVSRN ISSLQNAVVS ITRVQAGTSW NVIPDQAEME
260 270 280 290 300
GTVRTFQKEA RQAVPEHMRR VAEGIAAGYG AQAEFKWFPY LPSVQNDGTF
310 320 330 340 350
LNAASEAAAR LGYQTVHAEQ SPGGEDFALY QEKIPGFFVW MGTNGTEEWH
360 370 380
HPAFTLDEEA LTVASQYFAE LAVIVLETIK
Length:380
Mass (Da):41,552
Last modified:July 28, 2009 - v2
Checksum:iF36EAC6EF01AAFD3
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti54G → A in BAA08332 (PubMed:8867804).Curated1
Sequence conflicti194G → S in BAA08332 (PubMed:8867804).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D45912 Genomic DNA. Translation: BAA08332.1.
AL009126 Genomic DNA. Translation: CAB15983.2.
PIRiB70076.
RefSeqiNP_391826.2. NC_000964.3.
WP_003243840.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB15983; CAB15983; BSU39470.
GeneIDi937572.
KEGGibsu:BSU39470.
PATRICi18979958. VBIBacSub10457_4141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D45912 Genomic DNA. Translation: BAA08332.1.
AL009126 Genomic DNA. Translation: CAB15983.2.
PIRiB70076.
RefSeqiNP_391826.2. NC_000964.3.
WP_003243840.1. NZ_JNCM01000034.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YSJX-ray2.40A/B1-380[»]
ProteinModelPortaliP54955.
SMRiP54955.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100021296.

Protein family/group databases

MEROPSiM20.015.

Proteomic databases

PaxDbiP54955.

Protocols and materials databases

DNASUi937572.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15983; CAB15983; BSU39470.
GeneIDi937572.
KEGGibsu:BSU39470.
PATRICi18979958. VBIBacSub10457_4141.

Phylogenomic databases

eggNOGiENOG4105CH2. Bacteria.
COG1473. LUCA.
HOGENOMiHOG000241404.
InParanoidiP54955.
KOiK01436.
OMAiRRNLHEH.
PhylomeDBiP54955.

Enzyme and pathway databases

BioCyciBSUB:BSU39470-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP54955.

Family and domain databases

CDDicd05669. M20_Acy1_YxeP_like. 1 hit.
Gene3Di3.30.70.360. 1 hit.
InterProiIPR017439. Amidohydrolase.
IPR002933. Peptidase_M20.
IPR011650. Peptidase_M20_dimer.
IPR033846. YxeP.
[Graphical view]
PfamiPF07687. M20_dimer. 1 hit.
PF01546. Peptidase_M20. 1 hit.
[Graphical view]
PIRSFiPIRSF005962. Pept_M20D_amidohydro. 1 hit.
SUPFAMiSSF55031. SSF55031. 1 hit.
TIGRFAMsiTIGR01891. amidohydrolases. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYXEP_BACSU
AccessioniPrimary (citable) accession number: P54955
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 28, 2009
Last modified: November 30, 2016
This is version 118 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Peptidase families
    Classification of peptidase families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.