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P54907

- TRBB_RHIRD

UniProt

P54907 - TRBB_RHIRD

Protein

Conjugal transfer protein TrbB

Gene

trbB

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi151 – 1588ATPSequence Analysis

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. conjugation Source: UniProtKB-KW
    2. transport Source: UniProtKB-KW

    Keywords - Biological processi

    Conjugation, Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-6590-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Conjugal transfer protein TrbB
    Gene namesi
    Name:trbB
    Encoded oniPlasmid pTiA6NC0 Publication
    OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
    Taxonomic identifieri358 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

    Subcellular locationi

    Cytoplasm Curated

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 323323Conjugal transfer protein TrbBPRO_0000207300Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP54907.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GSP E family.Curated

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR014149. Conjug-transfer_TrbB.
    IPR027417. P-loop_NTPase.
    IPR001482. T2SS_protein-E.
    [Graphical view]
    PfamiPF00437. T2SE. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR02782. TrbB_P. 1 hit.
    PROSITEiPS00662. T2SP_E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P54907-1 [UniParc]FASTAAdd to Basket

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    MTQLRSHPRL VRKLQDSLGD QLCVALDDAT VVEIMLNPDG RLFIERLGHG    50
    VVAAGAMTPA AAEVVIGSVA HALQSEADDE RPIISGELPI GGHRFEGLLP 100
    PIVSGPAFTI RRRASRLIPL DDYVTSKVMT EAQASAIRSA IDSRMNIVIS 150
    GGTGSGKTTL ANAIIAEIVT AAPDDRLVIL EDTAEIQCAA ENAVSLHTSD 200
    TVDMARLLKS TMRLRPDRII VGEVRDGAAL TLLKAWNTGH PGGVTTIHSN 250
    TALSALRRLE QLTAEASQQL MQEVIGEAVD LIVSIERSGK GRRVREVIHI 300
    EGYRNNHYQT EHYAQIEEDS HVA 323
    Length:323
    Mass (Da):34,844
    Last modified:October 1, 1996 - v1
    Checksum:i651755469B9BF86E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF242881 Genomic DNA. Translation: AAB95094.1.
    RefSeqiNP_059760.1. NC_002377.1.
    WP_010892448.1. NC_002377.1.

    Genome annotation databases

    GeneIDi1224279.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF242881 Genomic DNA. Translation: AAB95094.1 .
    RefSeqi NP_059760.1. NC_002377.1.
    WP_010892448.1. NC_002377.1.

    3D structure databases

    ProteinModelPortali P54907.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1224279.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-6590-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR014149. Conjug-transfer_TrbB.
    IPR027417. P-loop_NTPase.
    IPR001482. T2SS_protein-E.
    [Graphical view ]
    Pfami PF00437. T2SE. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR02782. TrbB_P. 1 hit.
    PROSITEi PS00662. T2SP_E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The conjugal transfer system of Agrobacterium tumefaciens octopine-type Ti plasmids is closely related to the transfer system of an IncP plasmid and distantly related to Ti plasmid vir genes."
      Alt-Morbe J., Stryker J.L., Fuqua C., Li P.L., Farrand S.K., Winans S.C.
      J. Bacteriol. 178:4248-4257(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiTRBB_RHIRD
    AccessioniPrimary (citable) accession number: P54907
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Plasmid

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3