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P54907

- TRBB_RHIRD

UniProt

P54907 - TRBB_RHIRD

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Protein
Conjugal transfer protein TrbB
Gene
trbB
Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi151 – 1588ATP Reviewed prediction

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. conjugation Source: UniProtKB-KW
  2. transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Conjugation, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6590-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Conjugal transfer protein TrbB
Gene namesi
Name:trbB
Encoded oniPlasmid pTiA6NC0 Publication
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

Subcellular locationi

Cytoplasm Inferred

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 323323Conjugal transfer protein TrbB
PRO_0000207300Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP54907.

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP E family.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR014149. Conjug-transfer_TrbB.
IPR027417. P-loop_NTPase.
IPR001482. T2SS_protein-E.
[Graphical view]
PfamiPF00437. T2SE. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR02782. TrbB_P. 1 hit.
PROSITEiPS00662. T2SP_E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P54907-1 [UniParc]FASTAAdd to Basket

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MTQLRSHPRL VRKLQDSLGD QLCVALDDAT VVEIMLNPDG RLFIERLGHG    50
VVAAGAMTPA AAEVVIGSVA HALQSEADDE RPIISGELPI GGHRFEGLLP 100
PIVSGPAFTI RRRASRLIPL DDYVTSKVMT EAQASAIRSA IDSRMNIVIS 150
GGTGSGKTTL ANAIIAEIVT AAPDDRLVIL EDTAEIQCAA ENAVSLHTSD 200
TVDMARLLKS TMRLRPDRII VGEVRDGAAL TLLKAWNTGH PGGVTTIHSN 250
TALSALRRLE QLTAEASQQL MQEVIGEAVD LIVSIERSGK GRRVREVIHI 300
EGYRNNHYQT EHYAQIEEDS HVA 323
Length:323
Mass (Da):34,844
Last modified:October 1, 1996 - v1
Checksum:i651755469B9BF86E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF242881 Genomic DNA. Translation: AAB95094.1.
RefSeqiNP_059760.1. NC_002377.1.
WP_010892448.1. NC_002377.1.

Genome annotation databases

GeneIDi1224279.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF242881 Genomic DNA. Translation: AAB95094.1 .
RefSeqi NP_059760.1. NC_002377.1.
WP_010892448.1. NC_002377.1.

3D structure databases

ProteinModelPortali P54907.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1224279.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-6590-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR014149. Conjug-transfer_TrbB.
IPR027417. P-loop_NTPase.
IPR001482. T2SS_protein-E.
[Graphical view ]
Pfami PF00437. T2SE. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR02782. TrbB_P. 1 hit.
PROSITEi PS00662. T2SP_E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The conjugal transfer system of Agrobacterium tumefaciens octopine-type Ti plasmids is closely related to the transfer system of an IncP plasmid and distantly related to Ti plasmid vir genes."
    Alt-Morbe J., Stryker J.L., Fuqua C., Li P.L., Farrand S.K., Winans S.C.
    J. Bacteriol. 178:4248-4257(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiTRBB_RHIRD
AccessioniPrimary (citable) accession number: P54907
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: September 3, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Plasmid

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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