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Protein

Stationary phase-inducible protein CsiE

Gene

csiE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7329-MONOMER.
ECOL316407:JW5878-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Stationary phase-inducible protein CsiE
Gene namesi
Name:csiE
Ordered Locus Names:b2535, JW5878
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13418. csiE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 426426Stationary phase-inducible protein CsiEPRO_0000079400Add
BLAST

Proteomic databases

PaxDbiP54901.
PRIDEiP54901.

Interactioni

Protein-protein interaction databases

BioGridi4261386. 6 interactions.
DIPiDIP-9332N.
STRINGi511145.b2535.

Structurei

3D structure databases

ProteinModelPortaliP54901.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini120 – 225106PRD 1PROSITE-ProRule annotationAdd
BLAST
Domaini229 – 336108PRD 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 PRD domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4108MN2. Bacteria.
COG3711. LUCA.
HOGENOMiHOG000123491.
InParanoidiP54901.
OMAiFFAIGID.

Family and domain databases

Gene3Di1.10.1790.10. 1 hit.
InterProiIPR011608. PRD.
[Graphical view]
PfamiPF00874. PRD. 2 hits.
[Graphical view]
SUPFAMiSSF63520. SSF63520. 1 hit.
PROSITEiPS51372. PRD_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P54901-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPTLAPPSV LSAPQRRCQI LLTLFQPGLT ATMATFSELN GVDDDIASLD
60 70 80 90 100
ISETGREILR YHQLTLTTGY DGSYRVEGTV LNQRLCLFHW LRRGFRLCPS
110 120 130 140 150
FITSQFTPAL KSELKRRGIA RNFYDDTNLQ ALVNLCSRRL QKRFESRDIH
160 170 180 190 200
FLCLYLQYCL LQHHAGITPQ FNPLQRRWAE SCLEFQVAQE IGRHWQRRAL
210 220 230 240 250
QPVPPDEPLF MALLFSMLRV PDPLRDAHQR DRQLRQSIKR LVNHFRELGN
260 270 280 290 300
VRFYDEQGLC DQLYTHLAQA LNRSLFAIGI DNTLPEEFAR LYPRLVRTTR
310 320 330 340 350
AALAGFESEY GVHLSDEESG LVAVIFGAWL MQENDLHEKQ IILLTGNDSE
360 370 380 390 400
REAQIEQQLR ELTLLPLNIK HMSVKAFLQT GAPRGAALII APYTMPLPLF
410 420
SPPLIYTDLT LTTHQQEQIR KMLESA
Length:426
Mass (Da):49,040
Last modified:April 27, 2001 - v3
Checksum:i325523977A327D85
GO

Sequence cautioni

The sequence AAA98796 differs from that shown. Reason: Frameshift at position 391. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti342 – 3421I → L in AAA98796 (Ref. 1) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77687 Genomic DNA. Translation: AAA98796.1. Frameshift.
U00096 Genomic DNA. Translation: AAC75588.2.
AP009048 Genomic DNA. Translation: BAA16429.2.
RefSeqiNP_417030.2. NC_000913.3.
WP_000982994.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75588; AAC75588; b2535.
BAA16429; BAA16429; BAA16429.
GeneIDi947009.
KEGGiecj:JW5878.
eco:b2535.
PATRICi32120467. VBIEscCol129921_2636.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77687 Genomic DNA. Translation: AAA98796.1. Frameshift.
U00096 Genomic DNA. Translation: AAC75588.2.
AP009048 Genomic DNA. Translation: BAA16429.2.
RefSeqiNP_417030.2. NC_000913.3.
WP_000982994.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP54901.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261386. 6 interactions.
DIPiDIP-9332N.
STRINGi511145.b2535.

Proteomic databases

PaxDbiP54901.
PRIDEiP54901.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75588; AAC75588; b2535.
BAA16429; BAA16429; BAA16429.
GeneIDi947009.
KEGGiecj:JW5878.
eco:b2535.
PATRICi32120467. VBIEscCol129921_2636.

Organism-specific databases

EchoBASEiEB3194.
EcoGeneiEG13418. csiE.

Phylogenomic databases

eggNOGiENOG4108MN2. Bacteria.
COG3711. LUCA.
HOGENOMiHOG000123491.
InParanoidiP54901.
OMAiFFAIGID.

Enzyme and pathway databases

BioCyciEcoCyc:G7329-MONOMER.
ECOL316407:JW5878-MONOMER.

Miscellaneous databases

PROiP54901.

Family and domain databases

Gene3Di1.10.1790.10. 1 hit.
InterProiIPR011608. PRD.
[Graphical view]
PfamiPF00874. PRD. 2 hits.
[Graphical view]
SUPFAMiSSF63520. SSF63520. 1 hit.
PROSITEiPS51372. PRD_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCSIE_ECOLI
AccessioniPrimary (citable) accession number: P54901
Secondary accession number(s): P76582, P77573
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: April 27, 2001
Last modified: September 7, 2016
This is version 102 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.