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Protein

Uncharacterized ABC transporter ATP-binding protein YfiC

Gene

yfiC

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi399 – 406ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU08220-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YfiC
Gene namesi
Name:yfiC
Ordered Locus Names:BSU08220
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei50 – 70HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei86 – 106HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei172 – 192HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei288 – 308HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei510 – 530HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931411 – 604Uncharacterized ABC transporter ATP-binding protein YfiCAdd BLAST604

Proteomic databases

PaxDbiP54719.
PRIDEiP54719.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100004568.

Structurei

3D structure databases

ProteinModelPortaliP54719.
SMRiP54719.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 332ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST284
Domaini366 – 600ABC transporterPROSITE-ProRule annotationAdd BLAST235

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105BZ1. Bacteria.
COG1132. LUCA.
InParanoidiP54719.
KOiK06147.
OMAiTRAHGDL.
PhylomeDBiP54719.

Family and domain databases

InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiView protein in PROSITE
PS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P54719-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKDIRKPFQ YPKLPIDKKE GAKKRAKAKD TKGTLRRIWS YLAERKGLLI
60 70 80 90 100
LVMLMVVISA IFGLLGPFVI GKAIDHFIVG KTVSGLIPVL LLLLAIYIIQ
110 120 130 140 150
SLSLWFQNYW MITISQGTVF RMRSELFTHL HELPIPFFDK QRHGELMSRV
160 170 180 190 200
TNDIENVSST LNTSVIQILS SVITFVGTIA VMLYMSPLLT LITLTIIPVM
210 220 230 240 250
AASLKWITNR TGKLFKEQQK NLGDLNGYIE ESVSGAKVIK AYSREKQITA
260 270 280 290 300
EFLEKNAALK TSGFWAQTIS GFIPKVMNSL NNLSFTMIAA IGGLFALKGW
310 320 330 340 350
ISIGSIVVFA EYSRQFTRPL NDLANQFNTM LSAIAGAERV FDVLDEKEER
360 370 380 390 400
EDEKNAVHQP IQTGSIEFRD VSFGYDKGQQ TLKHLQFTVP AGQSIAFVGP
410 420 430 440 450
TGAGKTTVTN LLARFYEPND GKILIDGTDI KTLTRASLRK NMGFVLQDSF
460 470 480 490 500
LFQGTIRENI RYGRLDASDQ EVEAAAKTAN AHSFIERLPK GYDTVLTQNG
510 520 530 540 550
SGISQGQKQL ISIARAVLAD PVLLILDEAT SNIDTVTEVN IQEALARLME
560 570 580 590 600
GRTSVIIAHR LNTIQRADQI VVLKNGEMIE KGSHDELIRQ KGFYSDLYES

QFEK
Length:604
Mass (Da):67,396
Last modified:October 1, 1996 - v1
Checksum:i1998E4669A2E6133
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50543 Genomic DNA. Translation: BAA09107.1.
AL009126 Genomic DNA. Translation: CAB12651.1.
PIRiF69802.
RefSeqiNP_388703.1. NC_000964.3.
WP_003244082.1. NZ_JNCM01000032.1.

Genome annotation databases

EnsemblBacteriaiCAB12651; CAB12651; BSU08220.
GeneIDi936167.
KEGGibsu:BSU08220.
PATRICifig|224308.179.peg.888.

Similar proteinsi

Entry informationi

Entry nameiYFIC_BACSU
AccessioniPrimary (citable) accession number: P54719
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: June 7, 2017
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families