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P54469

- YQFD_BACSU

UniProt

P54469 - YQFD_BACSU

Protein

Uncharacterized protein YqfD

Gene

yqfD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 2 (07 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. sporulation resulting in formation of a cellular spore Source: UniProtKB-KW

    Keywords - Biological processi

    Sporulation

    Enzyme and pathway databases

    BioCyciBSUB:BSU25350-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YqfD
    Gene namesi
    Name:yqfD
    Ordered Locus Names:BSU25350
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU25350.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 398398Uncharacterized protein YqfDPRO_0000049796Add
    BLAST

    Proteomic databases

    PaxDbiP54469.

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU25350.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei88 – 10821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    To B.megaterium SpoIV.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG07111.
    HOGENOMiHOG000097016.
    KOiK06438.
    OrthoDBiEOG6X9MJS.
    PhylomeDBiP54469.

    Family and domain databases

    InterProiIPR010690. YqfD.
    [Graphical view]
    PfamiPF06898. YqfD. 1 hit.
    [Graphical view]
    PIRSFiPIRSF029895. SpoIV. 1 hit.
    TIGRFAMsiTIGR02876. spore_yqfD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P54469-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNKWLSFFS GKVQLELTGR GIERLLNECT RQGIPVFHVK KKKEAVSLYI    50
    QLQDVHAFRR VRSKFKCKAR FINRKGFPFL LLKSKLNIGF TIGFAIFFIL 100
    LFLLSNMVWK IDVTGAKPET EHQMRQHLNE IGVKKGRLQF LMMSPEKIQK 150
    SLTNGIDNIT WVGVDLKGTT IHMKVVEKNE PEKEKYVSPR NIVAKKKATI 200
    TRMFVQKGQP MAAIHDHVEK GQLLVSGLIG SEDHQQEVAS KAEIYGETWY 250
    RSEVTVPLET LFNVYTGKVR TKHKLSFGSL AIPIWGMTFK KEELKHPKTE 300
    QEKHSLHFLG FKLPVSYVKE QTRESEEALR KYTKEEAVQE GIKLGKQDVE 350
    DKIGENGEVK SEKVLHQTVE NGKVKLIILY QVIEDIVQTT PIVRETEE 398
    Length:398
    Mass (Da):45,815
    Last modified:July 7, 2009 - v2
    Checksum:i36329427C8EEED10
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti31 – 311R → K in BAA12476. (PubMed:8969508)Curated
    Sequence conflicti204 – 2041F → S in BAA12476. (PubMed:8969508)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D84432 Genomic DNA. Translation: BAA12476.1.
    AL009126 Genomic DNA. Translation: CAB14477.2.
    PIRiD69953.
    RefSeqiNP_390413.2. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAB14477; CAB14477; BSU25350.
    GeneIDi937867.
    KEGGibsu:BSU25350.
    PATRICi18976908. VBIBacSub10457_2643.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D84432 Genomic DNA. Translation: BAA12476.1 .
    AL009126 Genomic DNA. Translation: CAB14477.2 .
    PIRi D69953.
    RefSeqi NP_390413.2. NC_000964.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU25350.

    Proteomic databases

    PaxDbi P54469.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB14477 ; CAB14477 ; BSU25350 .
    GeneIDi 937867.
    KEGGi bsu:BSU25350.
    PATRICi 18976908. VBIBacSub10457_2643.

    Organism-specific databases

    GenoListi BSU25350.

    Phylogenomic databases

    eggNOGi NOG07111.
    HOGENOMi HOG000097016.
    KOi K06438.
    OrthoDBi EOG6X9MJS.
    PhylomeDBi P54469.

    Enzyme and pathway databases

    BioCyci BSUB:BSU25350-MONOMER.

    Family and domain databases

    InterProi IPR010690. YqfD.
    [Graphical view ]
    Pfami PF06898. YqfD. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF029895. SpoIV. 1 hit.
    TIGRFAMsi TIGR02876. spore_yqfD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Systematic sequencing of the 283 kb 210 degrees-232 degrees region of the Bacillus subtilis genome containing the skin element and many sporulation genes."
      Mizuno M., Masuda S., Takemaru K., Hosono S., Sato T., Takeuchi M., Kobayashi Y.
      Microbiology 142:3103-3111(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168 / JH642.
    2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.
    3. "From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later."
      Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.
      Microbiology 155:1758-1775(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: SEQUENCE REVISION TO 31 AND 204.

    Entry informationi

    Entry nameiYQFD_BACSU
    AccessioniPrimary (citable) accession number: P54469
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: July 7, 2009
    Last modified: October 1, 2014
    This is version 81 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

    External Data

    Dasty 3