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Protein

Glycine betaine transporter OpuD

Gene

opuD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

High-affinity uptake of glycine betaine. Does not mediate either carnitine or choline uptake.1 Publication

Enzyme regulationi

Activity is stimulated by high osmolarity.1 Publication

GO - Molecular functioni

GO - Biological processi

  • glycine betaine transport Source: CACAO
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciBSUB:BSU30070-MONOMER.

Protein family/group databases

TCDBi2.A.15.1.1. the betaine/carnitine/choline transporter (bcct) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine betaine transporter OpuD
Gene namesi
Name:opuD
Synonyms:ytfQ
Ordered Locus Names:BSU30070
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei5 – 25HelicalSequence analysisAdd BLAST21
Transmembranei45 – 65HelicalSequence analysisAdd BLAST21
Transmembranei82 – 102HelicalSequence analysisAdd BLAST21
Transmembranei135 – 155HelicalSequence analysisAdd BLAST21
Transmembranei186 – 206HelicalSequence analysisAdd BLAST21
Transmembranei222 – 242HelicalSequence analysisAdd BLAST21
Transmembranei257 – 277HelicalSequence analysisAdd BLAST21
Transmembranei312 – 332HelicalSequence analysisAdd BLAST21
Transmembranei343 – 363HelicalSequence analysisAdd BLAST21
Transmembranei395 – 415HelicalSequence analysisAdd BLAST21
Transmembranei441 – 461HelicalSequence analysisAdd BLAST21
Transmembranei464 – 484HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002014931 – 512Glycine betaine transporter OpuDAdd BLAST512

Proteomic databases

PaxDbiP54417.

Expressioni

Inductioni

Induced by high osmolarity.1 Publication

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016391.

Structurei

3D structure databases

ProteinModelPortaliP54417.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C94. Bacteria.
COG1292. LUCA.
HOGENOMiHOG000053240.
InParanoidiP54417.
KOiK05020.
OMAiDDWLKIN.
PhylomeDBiP54417.

Family and domain databases

InterProiIPR018093. BCCT_CS.
IPR000060. BCCT_transptr.
[Graphical view]
PfamiPF02028. BCCT. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00842. bcct. 1 hit.
PROSITEiPS01303. BCCT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P54417-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKHISSVFW IVIAITAAAV LWGVISPDSL QNVSQSAQAF ITDSFGWYYL
60 70 80 90 100
LVVSLFVGFC LFLIFSPIGK IKLGKPDEKP EFGLLSWFAM LFSAGMGIGL
110 120 130 140 150
VFYGAAEPIS HYAISSPSGE TETPQAFRDA LRYTFFHWGL HAWAIYAIVA
160 170 180 190 200
LCIAYFQFRK GAPGLISSTL SPILGDKVNG PIGKAIDCIA VFATVVGVST
210 220 230 240 250
SLGLGATQIN GGLNYLFGIP NAFIVQLVLI IIVTVLFLLS AWSGLGKGIK
260 270 280 290 300
YLSNTNMVLA GLLMLFMLVV GPTVLIMNSF TDSIGQYIQN IVQMSFRLTP
310 320 330 340 350
NDPEKREWIN SWTIFYWAWW ISWSPFVGIF IARVSRGRTI REFLIGVLVT
360 370 380 390 400
PCILTFLWFS IFGVSAMDLQ QKGAFNVAKL STETMLFGTL DHYPLTMVTS
410 420 430 440 450
ILALILIAVF FITSADSATF VLGMQTSYGS LNPANSVKLS WGIIQSAMAA
460 470 480 490 500
VLLYSGGLAA LQNTAILAAL PFSIVILLMI ASLYQSLSKE RREIKKAEKL
510
DKPRSPRVKK AY
Length:512
Mass (Da):56,122
Last modified:October 1, 1996 - v1
Checksum:iF1D8B1EEBE30F1FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50082 Genomic DNA. Translation: AAC44368.1.
AF008220 Genomic DNA. Translation: AAC00408.1.
AL009126 Genomic DNA. Translation: CAB14985.1.
PIRiG69670.
RefSeqiNP_390885.1. NC_000964.3.
WP_003229220.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14985; CAB14985; BSU30070.
GeneIDi937986.
KEGGibsu:BSU30070.
PATRICi18977918. VBIBacSub10457_3147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50082 Genomic DNA. Translation: AAC44368.1.
AF008220 Genomic DNA. Translation: AAC00408.1.
AL009126 Genomic DNA. Translation: CAB14985.1.
PIRiG69670.
RefSeqiNP_390885.1. NC_000964.3.
WP_003229220.1. NZ_JNCM01000036.1.

3D structure databases

ProteinModelPortaliP54417.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100016391.

Protein family/group databases

TCDBi2.A.15.1.1. the betaine/carnitine/choline transporter (bcct) family.

Proteomic databases

PaxDbiP54417.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14985; CAB14985; BSU30070.
GeneIDi937986.
KEGGibsu:BSU30070.
PATRICi18977918. VBIBacSub10457_3147.

Phylogenomic databases

eggNOGiENOG4105C94. Bacteria.
COG1292. LUCA.
HOGENOMiHOG000053240.
InParanoidiP54417.
KOiK05020.
OMAiDDWLKIN.
PhylomeDBiP54417.

Enzyme and pathway databases

BioCyciBSUB:BSU30070-MONOMER.

Family and domain databases

InterProiIPR018093. BCCT_CS.
IPR000060. BCCT_transptr.
[Graphical view]
PfamiPF02028. BCCT. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00842. bcct. 1 hit.
PROSITEiPS01303. BCCT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiOPUD_BACSU
AccessioniPrimary (citable) accession number: P54417
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 5, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.