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P54371

- Y104_SYNY3

UniProt

P54371 - Y104_SYNY3

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Protein
Uncharacterized protein slr0104
Gene
slr0104
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. phosphoric diester hydrolase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein slr0104
Gene namesi
Ordered Locus Names:slr0104
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei50 – 7021Helical; Reviewed prediction
Add
BLAST
Transmembranei376 – 39621Helical; Reviewed prediction
Add
BLAST
Transmembranei409 – 42921Helical; Reviewed prediction
Add
BLAST
Transmembranei442 – 46221Helical; Reviewed prediction
Add
BLAST
Transmembranei466 – 48621Helical; Reviewed prediction
Add
BLAST
Transmembranei496 – 51621Helical; Reviewed prediction
Add
BLAST
Transmembranei529 – 54921Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 811811Uncharacterized protein slr0104
PRO_0000157861Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP54371. 2 interactions.
STRINGi1148.slr0104.

Structurei

3D structure databases

ProteinModelPortaliP54371.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini586 – 734149HD
Add
BLAST

Sequence similaritiesi

Contains 1 HD domain.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1480.
KOiK07037.
OMAiLADSCEA.
OrthoDBiEOG6VXF6V.
PhylomeDBiP54371.

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR011624. Metal-dep_PHydrolase_7TM_extra.
IPR011621. Metal-dep_PHydrolase_7TM_intra.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamiPF07698. 7TM-7TMR_HD. 1 hit.
PF07697. 7TMR-HDED. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.

Sequencei

Sequence statusi: Complete.

P54371-1 [UniParc]FASTAAdd to Basket

« Hide

MKAIFALRQA VASQLKKSTA SSHPLPRTTA STSQDETIWQ KIHRSRFVRI    50
AHPPVMLGIT VVSLTGVVGY RFYNQPQLSV GTESPYTIYA PEDGSFVDER 100
TTEEKRKEVR AGTIPRLQRD NELTAQLKQE RSQYLDAINQ LRYLAGTFPY 150
IDTKIFTLEQ QHLLRSLGPG EWQQLEDYIS YGQPLPMASP QLAKLQQLFD 200
QQKATTSPET MAGLLTSIRT AQDRYGRVTA RLAEVKADRQ ITNNQIGALK 250
LDGPTWQTTQ QTIIQVHDRI LTQGLPAGIT APLLGETVQL HLRNILPPQA 300
HQVAENSLNN LLKDKYNLTV DKEATKNLAE KAVLAMENVK VSAEKNSVIV 350
RAGEVITQEQ FVLLDGYGLS QRQVNWQGLL RTAGLVGGAL IIFCGVSRRI 400
HRPLRRRDHI LLCLLSVSTP VLFLLDPVYN NLPAISLLTS SFYGPTLAIT 450
QVVLVGGLSA FAMESIVWEY LLGSAAAALL AGMIASKLRS RDELALLGVG 500
VGATQGIVYL FTYLIVNASA VTIIWYTALP SAIVYGLLGL AWSAMAIGVS 550
PYLERLFDVV TPTRLVELSN PNCPLLQRLA KEAPGTFQHT LFVACLAESA 600
ARELRCNVEL VRTGTLYHDI GKMHDPLGFI ENQMGGPNKH DEINDPYVSV 650
DIIKKHVSEG LVMARRYGLP QVVRDFIPEH QGQMLISYFY IQAKEAAERA 700
GEPPVNEEEF RYTGPIPQSR ETGIVMLADS CEAALRSLRE ANPETAMAMV 750
NRIFKARWRD NQLQDSGLKY EELPIIADVF VRVWQQFHHQ RIAYPKAALD 800
VQVTSPSTTR F 811
Length:811
Mass (Da):90,255
Last modified:October 1, 1996 - v1
Checksum:iF6015BEBF804F255
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10634.1.
PIRiS76690.
RefSeqiNP_442564.1. NC_000911.1.
YP_005652625.1. NC_017277.1.
YP_007452440.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10634; BAA10634; BAA10634.
GeneIDi952272.
KEGGisyn:slr0104.
syy:SYNGTS_2672.
syz:MYO_126970.
PATRICi23842852. VBISynSp132158_2965.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10634.1 .
PIRi S76690.
RefSeqi NP_442564.1. NC_000911.1.
YP_005652625.1. NC_017277.1.
YP_007452440.1. NC_020286.1.

3D structure databases

ProteinModelPortali P54371.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P54371. 2 interactions.
STRINGi 1148.slr0104.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10634 ; BAA10634 ; BAA10634 .
GeneIDi 952272.
KEGGi syn:slr0104.
syy:SYNGTS_2672.
syz:MYO_126970.
PATRICi 23842852. VBISynSp132158_2965.

Phylogenomic databases

eggNOGi COG1480.
KOi K07037.
OMAi LADSCEA.
OrthoDBi EOG6VXF6V.
PhylomeDBi P54371.

Family and domain databases

Gene3Di 1.10.3210.10. 2 hits.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR011624. Metal-dep_PHydrolase_7TM_extra.
IPR011621. Metal-dep_PHydrolase_7TM_intra.
IPR006675. Uncharacterised_HDIG.
[Graphical view ]
Pfami PF07698. 7TM-7TMR_HD. 1 hit.
PF07697. 7TMR-HDED. 1 hit.
PF01966. HD. 1 hit.
[Graphical view ]
SMARTi SM00471. HDc. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00277. HDIG. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY104_SYNY3
AccessioniPrimary (citable) accession number: P54371
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 9, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

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