Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P54371 (Y104_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 90. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein slr0104
Gene names
Ordered Locus Names:slr0104
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length811 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Contains 1 HD domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 811811Uncharacterized protein slr0104
PRO_0000157861

Regions

Transmembrane50 – 7021Helical; Potential
Transmembrane376 – 39621Helical; Potential
Transmembrane409 – 42921Helical; Potential
Transmembrane442 – 46221Helical; Potential
Transmembrane466 – 48621Helical; Potential
Transmembrane496 – 51621Helical; Potential
Transmembrane529 – 54921Helical; Potential
Domain586 – 734149HD

Sequences

Sequence LengthMass (Da)Tools
P54371 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: F6015BEBF804F255

FASTA81190,255
        10         20         30         40         50         60 
MKAIFALRQA VASQLKKSTA SSHPLPRTTA STSQDETIWQ KIHRSRFVRI AHPPVMLGIT 

        70         80         90        100        110        120 
VVSLTGVVGY RFYNQPQLSV GTESPYTIYA PEDGSFVDER TTEEKRKEVR AGTIPRLQRD 

       130        140        150        160        170        180 
NELTAQLKQE RSQYLDAINQ LRYLAGTFPY IDTKIFTLEQ QHLLRSLGPG EWQQLEDYIS 

       190        200        210        220        230        240 
YGQPLPMASP QLAKLQQLFD QQKATTSPET MAGLLTSIRT AQDRYGRVTA RLAEVKADRQ 

       250        260        270        280        290        300 
ITNNQIGALK LDGPTWQTTQ QTIIQVHDRI LTQGLPAGIT APLLGETVQL HLRNILPPQA 

       310        320        330        340        350        360 
HQVAENSLNN LLKDKYNLTV DKEATKNLAE KAVLAMENVK VSAEKNSVIV RAGEVITQEQ 

       370        380        390        400        410        420 
FVLLDGYGLS QRQVNWQGLL RTAGLVGGAL IIFCGVSRRI HRPLRRRDHI LLCLLSVSTP 

       430        440        450        460        470        480 
VLFLLDPVYN NLPAISLLTS SFYGPTLAIT QVVLVGGLSA FAMESIVWEY LLGSAAAALL 

       490        500        510        520        530        540 
AGMIASKLRS RDELALLGVG VGATQGIVYL FTYLIVNASA VTIIWYTALP SAIVYGLLGL 

       550        560        570        580        590        600 
AWSAMAIGVS PYLERLFDVV TPTRLVELSN PNCPLLQRLA KEAPGTFQHT LFVACLAESA 

       610        620        630        640        650        660 
ARELRCNVEL VRTGTLYHDI GKMHDPLGFI ENQMGGPNKH DEINDPYVSV DIIKKHVSEG 

       670        680        690        700        710        720 
LVMARRYGLP QVVRDFIPEH QGQMLISYFY IQAKEAAERA GEPPVNEEEF RYTGPIPQSR 

       730        740        750        760        770        780 
ETGIVMLADS CEAALRSLRE ANPETAMAMV NRIFKARWRD NQLQDSGLKY EELPIIADVF 

       790        800        810 
VRVWQQFHHQ RIAYPKAALD VQVTSPSTTR F 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10634.1.
PIRS76690.
RefSeqNP_442564.1. NC_000911.1.
YP_005652625.1. NC_017277.1.
YP_007452440.1. NC_020286.1.

3D structure databases

ProteinModelPortalP54371.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP54371. 2 interactions.
STRING1148.slr0104.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10634; BAA10634; BAA10634.
GeneID12254017.
14618121.
952272.
KEGGsyn:slr0104.
syy:SYNGTS_2672.
syz:MYO_126970.
PATRIC23842852. VBISynSp132158_2965.

Phylogenomic databases

eggNOGCOG1480.
KOK07037.
OMALADSCEA.
OrthoDBEOG6VXF6V.
PhylomeDBP54371.
ProtClustDBCLSK893621.

Family and domain databases

Gene3D1.10.3210.10. 2 hits.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR011624. Metal-dep_PHydrolase_7TM_extra.
IPR011621. Metal-dep_PHydrolase_7TM_intra.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamPF07698. 7TM-7TMR_HD. 1 hit.
PF07697. 7TMR-HDED. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00277. HDIG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY104_SYNY3
AccessionPrimary (citable) accession number: P54371
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 16, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families