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P54371

- Y104_SYNY3

UniProt

P54371 - Y104_SYNY3

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Protein

Uncharacterized protein slr0104

Gene

slr0104

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein slr0104
Gene namesi
Ordered Locus Names:slr0104
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei50 – 7021HelicalSequence AnalysisAdd
BLAST
Transmembranei376 – 39621HelicalSequence AnalysisAdd
BLAST
Transmembranei409 – 42921HelicalSequence AnalysisAdd
BLAST
Transmembranei442 – 46221HelicalSequence AnalysisAdd
BLAST
Transmembranei466 – 48621HelicalSequence AnalysisAdd
BLAST
Transmembranei496 – 51621HelicalSequence AnalysisAdd
BLAST
Transmembranei529 – 54921HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 811811Uncharacterized protein slr0104PRO_0000157861Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP54371. 2 interactions.
STRINGi1148.slr0104.

Structurei

3D structure databases

ProteinModelPortaliP54371.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini586 – 734149HDAdd
BLAST

Sequence similaritiesi

Contains 1 HD domain.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1480.
InParanoidiP54371.
KOiK07037.
OMAiLADSCEA.
OrthoDBiEOG6VXF6V.
PhylomeDBiP54371.

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR011624. Metal-dep_PHydrolase_7TM_extra.
IPR011621. Metal-dep_PHydrolase_7TM_intra.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamiPF07698. 7TM-7TMR_HD. 1 hit.
PF07697. 7TMR-HDED. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00277. HDIG. 1 hit.

Sequencei

Sequence statusi: Complete.

P54371-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAIFALRQA VASQLKKSTA SSHPLPRTTA STSQDETIWQ KIHRSRFVRI
60 70 80 90 100
AHPPVMLGIT VVSLTGVVGY RFYNQPQLSV GTESPYTIYA PEDGSFVDER
110 120 130 140 150
TTEEKRKEVR AGTIPRLQRD NELTAQLKQE RSQYLDAINQ LRYLAGTFPY
160 170 180 190 200
IDTKIFTLEQ QHLLRSLGPG EWQQLEDYIS YGQPLPMASP QLAKLQQLFD
210 220 230 240 250
QQKATTSPET MAGLLTSIRT AQDRYGRVTA RLAEVKADRQ ITNNQIGALK
260 270 280 290 300
LDGPTWQTTQ QTIIQVHDRI LTQGLPAGIT APLLGETVQL HLRNILPPQA
310 320 330 340 350
HQVAENSLNN LLKDKYNLTV DKEATKNLAE KAVLAMENVK VSAEKNSVIV
360 370 380 390 400
RAGEVITQEQ FVLLDGYGLS QRQVNWQGLL RTAGLVGGAL IIFCGVSRRI
410 420 430 440 450
HRPLRRRDHI LLCLLSVSTP VLFLLDPVYN NLPAISLLTS SFYGPTLAIT
460 470 480 490 500
QVVLVGGLSA FAMESIVWEY LLGSAAAALL AGMIASKLRS RDELALLGVG
510 520 530 540 550
VGATQGIVYL FTYLIVNASA VTIIWYTALP SAIVYGLLGL AWSAMAIGVS
560 570 580 590 600
PYLERLFDVV TPTRLVELSN PNCPLLQRLA KEAPGTFQHT LFVACLAESA
610 620 630 640 650
ARELRCNVEL VRTGTLYHDI GKMHDPLGFI ENQMGGPNKH DEINDPYVSV
660 670 680 690 700
DIIKKHVSEG LVMARRYGLP QVVRDFIPEH QGQMLISYFY IQAKEAAERA
710 720 730 740 750
GEPPVNEEEF RYTGPIPQSR ETGIVMLADS CEAALRSLRE ANPETAMAMV
760 770 780 790 800
NRIFKARWRD NQLQDSGLKY EELPIIADVF VRVWQQFHHQ RIAYPKAALD
810
VQVTSPSTTR F
Length:811
Mass (Da):90,255
Last modified:October 1, 1996 - v1
Checksum:iF6015BEBF804F255
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10634.1.
PIRiS76690.
RefSeqiNP_442564.1. NC_000911.1.
YP_005652625.1. NC_017277.1.
YP_007452440.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10634; BAA10634; BAA10634.
GeneIDi952272.
KEGGisyn:slr0104.
PATRICi23842852. VBISynSp132158_2965.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10634.1 .
PIRi S76690.
RefSeqi NP_442564.1. NC_000911.1.
YP_005652625.1. NC_017277.1.
YP_007452440.1. NC_020286.1.

3D structure databases

ProteinModelPortali P54371.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P54371. 2 interactions.
STRINGi 1148.slr0104.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10634 ; BAA10634 ; BAA10634 .
GeneIDi 952272.
KEGGi syn:slr0104.
PATRICi 23842852. VBISynSp132158_2965.

Phylogenomic databases

eggNOGi COG1480.
InParanoidi P54371.
KOi K07037.
OMAi LADSCEA.
OrthoDBi EOG6VXF6V.
PhylomeDBi P54371.

Family and domain databases

Gene3Di 1.10.3210.10. 2 hits.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR011624. Metal-dep_PHydrolase_7TM_extra.
IPR011621. Metal-dep_PHydrolase_7TM_intra.
IPR006675. Uncharacterised_HDIG.
[Graphical view ]
Pfami PF07698. 7TM-7TMR_HD. 1 hit.
PF07697. 7TMR-HDED. 1 hit.
PF01966. HD. 1 hit.
[Graphical view ]
SMARTi SM00471. HDc. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00277. HDIG. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY104_SYNY3
AccessioniPrimary (citable) accession number: P54371
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: November 26, 2014
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3