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P54371

- Y104_SYNY3

UniProt

P54371 - Y104_SYNY3

Protein

Uncharacterized protein slr0104

Gene

slr0104

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 93 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. phosphoric diester hydrolase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein slr0104
    Gene namesi
    Ordered Locus Names:slr0104
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 811811Uncharacterized protein slr0104PRO_0000157861Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    IntActiP54371. 2 interactions.
    STRINGi1148.slr0104.

    Structurei

    3D structure databases

    ProteinModelPortaliP54371.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei50 – 7021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei376 – 39621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei409 – 42921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei442 – 46221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei466 – 48621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei496 – 51621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei529 – 54921HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini586 – 734149HDAdd
    BLAST

    Sequence similaritiesi

    Contains 1 HD domain.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG1480.
    KOiK07037.
    OMAiLADSCEA.
    OrthoDBiEOG6VXF6V.
    PhylomeDBiP54371.

    Family and domain databases

    Gene3Di1.10.3210.10. 2 hits.
    InterProiIPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR011624. Metal-dep_PHydrolase_7TM_extra.
    IPR011621. Metal-dep_PHydrolase_7TM_intra.
    IPR006675. Uncharacterised_HDIG.
    [Graphical view]
    PfamiPF07698. 7TM-7TMR_HD. 1 hit.
    PF07697. 7TMR-HDED. 1 hit.
    PF01966. HD. 1 hit.
    [Graphical view]
    SMARTiSM00471. HDc. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00277. HDIG. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P54371-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAIFALRQA VASQLKKSTA SSHPLPRTTA STSQDETIWQ KIHRSRFVRI    50
    AHPPVMLGIT VVSLTGVVGY RFYNQPQLSV GTESPYTIYA PEDGSFVDER 100
    TTEEKRKEVR AGTIPRLQRD NELTAQLKQE RSQYLDAINQ LRYLAGTFPY 150
    IDTKIFTLEQ QHLLRSLGPG EWQQLEDYIS YGQPLPMASP QLAKLQQLFD 200
    QQKATTSPET MAGLLTSIRT AQDRYGRVTA RLAEVKADRQ ITNNQIGALK 250
    LDGPTWQTTQ QTIIQVHDRI LTQGLPAGIT APLLGETVQL HLRNILPPQA 300
    HQVAENSLNN LLKDKYNLTV DKEATKNLAE KAVLAMENVK VSAEKNSVIV 350
    RAGEVITQEQ FVLLDGYGLS QRQVNWQGLL RTAGLVGGAL IIFCGVSRRI 400
    HRPLRRRDHI LLCLLSVSTP VLFLLDPVYN NLPAISLLTS SFYGPTLAIT 450
    QVVLVGGLSA FAMESIVWEY LLGSAAAALL AGMIASKLRS RDELALLGVG 500
    VGATQGIVYL FTYLIVNASA VTIIWYTALP SAIVYGLLGL AWSAMAIGVS 550
    PYLERLFDVV TPTRLVELSN PNCPLLQRLA KEAPGTFQHT LFVACLAESA 600
    ARELRCNVEL VRTGTLYHDI GKMHDPLGFI ENQMGGPNKH DEINDPYVSV 650
    DIIKKHVSEG LVMARRYGLP QVVRDFIPEH QGQMLISYFY IQAKEAAERA 700
    GEPPVNEEEF RYTGPIPQSR ETGIVMLADS CEAALRSLRE ANPETAMAMV 750
    NRIFKARWRD NQLQDSGLKY EELPIIADVF VRVWQQFHHQ RIAYPKAALD 800
    VQVTSPSTTR F 811
    Length:811
    Mass (Da):90,255
    Last modified:October 1, 1996 - v1
    Checksum:iF6015BEBF804F255
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10634.1.
    PIRiS76690.
    RefSeqiNP_442564.1. NC_000911.1.
    YP_005652625.1. NC_017277.1.
    YP_007452440.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10634; BAA10634; BAA10634.
    GeneIDi952272.
    KEGGisyn:slr0104.
    syy:SYNGTS_2672.
    syz:MYO_126970.
    PATRICi23842852. VBISynSp132158_2965.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10634.1 .
    PIRi S76690.
    RefSeqi NP_442564.1. NC_000911.1.
    YP_005652625.1. NC_017277.1.
    YP_007452440.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P54371.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P54371. 2 interactions.
    STRINGi 1148.slr0104.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10634 ; BAA10634 ; BAA10634 .
    GeneIDi 952272.
    KEGGi syn:slr0104.
    syy:SYNGTS_2672.
    syz:MYO_126970.
    PATRICi 23842852. VBISynSp132158_2965.

    Phylogenomic databases

    eggNOGi COG1480.
    KOi K07037.
    OMAi LADSCEA.
    OrthoDBi EOG6VXF6V.
    PhylomeDBi P54371.

    Family and domain databases

    Gene3Di 1.10.3210.10. 2 hits.
    InterProi IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR011624. Metal-dep_PHydrolase_7TM_extra.
    IPR011621. Metal-dep_PHydrolase_7TM_intra.
    IPR006675. Uncharacterised_HDIG.
    [Graphical view ]
    Pfami PF07698. 7TM-7TMR_HD. 1 hit.
    PF07697. 7TMR-HDED. 1 hit.
    PF01966. HD. 1 hit.
    [Graphical view ]
    SMARTi SM00471. HDc. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00277. HDIG. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
      Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
      DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27184 / PCC 6803 / N-1.
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiY104_SYNY3
    AccessioniPrimary (citable) accession number: P54371
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 93 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3