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P54206

- RBS_SYNY3

UniProt

P54206 - RBS_SYNY3

Protein

Ribulose bisphosphate carboxylase small chain

Gene

cbbS

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity.By similarity

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

    GO - Molecular functioni

    1. monooxygenase activity Source: UniProtKB-KW
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. reductive pentose-phosphate cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase, Monooxygenase, Oxidoreductase

    Keywords - Biological processi

    Calvin cycle, Carbon dioxide fixation, Photosynthesis

    Enzyme and pathway databases

    BioCyciMetaCyc:MONOMER-751.
    SABIO-RKP54206.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chain (EC:4.1.1.39)
    Short name:
    RuBisCO small subunit
    Gene namesi
    Name:cbbS
    Synonyms:rbcS
    Ordered Locus Names:slr0012
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 113113Ribulose bisphosphate carboxylase small chainPRO_0000198627Add
    BLAST

    Proteomic databases

    PaxDbiP54206.

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.

    Protein-protein interaction databases

    IntActiP54206. 17 interactions.
    STRINGi1148.slr0012.

    Structurei

    3D structure databases

    ProteinModelPortaliP54206.
    SMRiP54206. Positions 1-108.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.Curated

    Phylogenomic databases

    eggNOGiCOG4451.
    HOGENOMiHOG000141332.
    KOiK01602.
    OMAiMFDLKDA.
    OrthoDBiEOG6G20PM.
    PhylomeDBiP54206.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P54206-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTLPKERRY ETLSYLPPLT DQQIAKQVEF LLDQGFIPGV EFEEDPQPET    50
    HFWTMWKLPF FGGATANEVL AEVRECRSEN PNCYIRVIGF DNIKQCQTVS 100
    FIVHKPNQNQ GRY 113
    Length:113
    Mass (Da):13,239
    Last modified:October 1, 1996 - v1
    Checksum:i20C762A777F4E623
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65960 Genomic DNA. Translation: CAA46774.1.
    BA000022 Genomic DNA. Translation: BAA10192.1.
    PIRiS39562.
    RefSeqiNP_442122.1. NC_000911.1.
    YP_005652180.1. NC_017277.1.
    YP_007451999.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10192; BAA10192; BAA10192.
    GeneIDi952633.
    KEGGisyn:slr0012.
    syy:SYNGTS_2227.
    syz:MYO_122510.
    PATRICi23841846. VBISynSp132158_2467.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65960 Genomic DNA. Translation: CAA46774.1 .
    BA000022 Genomic DNA. Translation: BAA10192.1 .
    PIRi S39562.
    RefSeqi NP_442122.1. NC_000911.1.
    YP_005652180.1. NC_017277.1.
    YP_007451999.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P54206.
    SMRi P54206. Positions 1-108.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P54206. 17 interactions.
    STRINGi 1148.slr0012.

    Proteomic databases

    PaxDbi P54206.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10192 ; BAA10192 ; BAA10192 .
    GeneIDi 952633.
    KEGGi syn:slr0012.
    syy:SYNGTS_2227.
    syz:MYO_122510.
    PATRICi 23841846. VBISynSp132158_2467.

    Phylogenomic databases

    eggNOGi COG4451.
    HOGENOMi HOG000141332.
    KOi K01602.
    OMAi MFDLKDA.
    OrthoDBi EOG6G20PM.
    PhylomeDBi P54206.

    Enzyme and pathway databases

    BioCyci MetaCyc:MONOMER-751.
    SABIO-RK P54206.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Construction of a Synechocystis PCC6803 mutant suitable for the study of variant hexadecameric ribulose bisphosphate carboxylase/oxygenase enzymes."
      Amichay D., Levitz R., Gurevitz M.
      Plant Mol. Biol. 23:465-476(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
      Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
      DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27184 / PCC 6803 / N-1.
    3. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiRBS_SYNY3
    AccessioniPrimary (citable) accession number: P54206
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 92 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3