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Protein

Uncharacterized protein YpjQ

Gene

ypjQ

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBSUB:BSU21830-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YpjQ
Gene namesi
Name:ypjQ
Ordered Locus Names:BSU21830
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 177177Uncharacterized protein YpjQPRO_0000049707Add
BLAST

Proteomic databases

PaxDbiP54173.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100012021.

Structurei

Secondary structure

1
177
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi6 – 1914Combined sources
Helixi24 – 3411Combined sources
Turni35 – 384Combined sources
Helixi44 – 5411Combined sources
Helixi58 – 7518Combined sources
Helixi83 – 897Combined sources
Helixi96 – 994Combined sources
Helixi102 – 1065Combined sources
Helixi109 – 12113Combined sources
Helixi126 – 1294Combined sources
Beta strandi131 – 1333Combined sources
Helixi141 – 15717Combined sources
Helixi159 – 1635Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TLQX-ray2.40A2-177[»]
ProteinModelPortaliP54173.
SMRiP54173. Positions 4-164.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP54173.

Family & Domainsi

Sequence similaritiesi

To B.subtilis YutG.Curated

Phylogenomic databases

eggNOGiCOG1267. LUCA.
HOGENOMiHOG000067881.
InParanoidiP54173.
OMAiRCNTFID.
OrthoDBiEOG6M9F22.
PhylomeDBiP54173.

Family and domain databases

Gene3Di1.10.3760.10. 1 hit.
InterProiIPR026038. Put_PGPase.
IPR027416. YutG-like.
IPR007686. YutG/PgpA.
[Graphical view]
PfamiPF04608. PgpA. 1 hit.
[Graphical view]
PIRSFiPIRSF019587. PGPase. 1 hit.
SUPFAMiSSF101307. SSF101307. 1 hit.

Sequencei

Sequence statusi: Complete.

P54173-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKYTMNEMV DITKDMLNKR GVMIEDIARI VQKLQEKYNP NLPLSVCMEN
60 70 80 90 100
VEKVLNKREI IHAVLTGLAL DQLAEQKLLP EPLQHLVETD EPLYGIDEII
110 120 130 140 150
PLSIVNVYGS IGLTNFGYLD KEKIGIIKEL DESPDGIHTF LDDIVAALAA
160 170
AAASRIAHTH QDLQDEEKEQ DEKPVVS
Length:177
Mass (Da):19,902
Last modified:October 1, 1996 - v1
Checksum:i0558F1D2E6B20B61
GO

Sequence cautioni

The sequence M20012 differs from that shown. Reason: Frameshift at positions 77, 132 and 137. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77246 Genomic DNA. Translation: AAA96633.1.
M20012 Genomic DNA. No translation available.
AL009126 Genomic DNA. Translation: CAB14101.1.
PIRiA69938.
RefSeqiNP_390066.1. NC_000964.3.
WP_003230797.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14101; CAB14101; BSU21830.
GeneIDi939087.
KEGGibsu:BSU21830.
PATRICi18976171. VBIBacSub10457_2276.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77246 Genomic DNA. Translation: AAA96633.1.
M20012 Genomic DNA. No translation available.
AL009126 Genomic DNA. Translation: CAB14101.1.
PIRiA69938.
RefSeqiNP_390066.1. NC_000964.3.
WP_003230797.1. NZ_JNCM01000036.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TLQX-ray2.40A2-177[»]
ProteinModelPortaliP54173.
SMRiP54173. Positions 4-164.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100012021.

Proteomic databases

PaxDbiP54173.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14101; CAB14101; BSU21830.
GeneIDi939087.
KEGGibsu:BSU21830.
PATRICi18976171. VBIBacSub10457_2276.

Phylogenomic databases

eggNOGiCOG1267. LUCA.
HOGENOMiHOG000067881.
InParanoidiP54173.
OMAiRCNTFID.
OrthoDBiEOG6M9F22.
PhylomeDBiP54173.

Enzyme and pathway databases

BioCyciBSUB:BSU21830-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP54173.

Family and domain databases

Gene3Di1.10.3760.10. 1 hit.
InterProiIPR026038. Put_PGPase.
IPR027416. YutG-like.
IPR007686. YutG/PgpA.
[Graphical view]
PfamiPF04608. PgpA. 1 hit.
[Graphical view]
PIRSFiPIRSF019587. PGPase. 1 hit.
SUPFAMiSSF101307. SSF101307. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Organization of the Bacillus subtilis 168 chromosome between kdg and the attachment site of the SP beta prophage: use of long accurate PCR and yeast artificial chromosomes for sequencing."
    Capuano V., Galleron N., Pujic P., Sorokin A., Ehrlich S.D.
    Microbiology 142:3005-3015(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB 3610 / VKM B-501.
  2. "Nucleotide sequence of the thymidylate synthase B and dihydrofolate reductase genes contained in one Bacillus subtilis operon."
    Iwakura M., Kawata M., Tsuda K., Tanaka T.
    Gene 64:9-20(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  4. "Crystal structure of a hypothetical protein from Bacillus subtilis."
    New York structural genomix research consortium (NYSGXRC)
    Submitted (JAN-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS).

Entry informationi

Entry nameiYPJQ_BACSU
AccessioniPrimary (citable) accession number: P54173
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: February 17, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.