P54147 (Y108_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative ammonium transporter sll0108

Gene names

Ordered Locus Names:

sll0108

Organism

Synechocystis sp. (strain PCC 6803 / Kazusa)

Taxonomic identifier

1111708 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechocystis

Protein attributes

Sequence length	507 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Probable.
Sequence similarities	Belongs to the ammonia transporter channel (TC 1.A.11.2) family. [View classification]

Ontologies

Keywords
Biological process	Ammonia transport Transport
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ammonium transmembrane transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 507	507	Putative ammonium transporter sll0108		PRO_0000139761
Regions
	Transmembrane	44 – 64	21	Helical; Potential
	Transmembrane	90 – 110	21	Helical; Potential
	Transmembrane	128 – 148	21	Helical; Potential
	Transmembrane	154 – 174	21	Helical; Potential
	Transmembrane	178 – 198	21	Helical; Potential
	Transmembrane	211 – 231	21	Helical; Potential
	Transmembrane	245 – 265	21	Helical; Potential
	Transmembrane	286 – 306	21	Helical; Potential
	Transmembrane	315 – 335	21	Helical; Potential
	Transmembrane	347 – 367	21	Helical; Potential
	Transmembrane	370 – 390	21	Helical; Potential
	Transmembrane	399 – 419	21	Helical; Potential
	Transmembrane	438 – 458	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P54147 [UniParc]. Last modified October 1, 1996. Version 1. Checksum: 1840AE99FFA08E6A	FASTA	507	53,580
	10 20 30 40 50 60 MSNSILSKLN VGERSPVNRT HSSRTEAEKS SLFRFVRRKI NSPWLACVPL TALIVAIWNA 70 80 90 100 110 120 AAIAQDTEIV NITVETVNEN VATLQGTLNA IWILIAAILV IFMNAGFGML ETGLCRQKNA 130 140 150 160 170 180 VNILTKNLIV FALATIAYWA IGFSLMFGSS GNPFVGFGGF FLSGDHTNYG LSPFPEGLPV 190 200 210 220 230 240 AVFFLFQVAF SATAATIVSG AVAERIKFNE FLIFSVLLVG IAYPITGHWV WDAGGWLYTM 250 260 270 280 290 300 GFMDFAGSTV VHSVGGWAAL AGAFLLGPRL GKFVDGRPGA IPGHNMGFAM LGCLILWIGW 310 320 330 340 350 360 FGFNPGSQLA ADQACAYIAV TTNLAASAGG LTATFTSWLK DGKPDLTMVI NGVLAGLVGI 370 380 390 400 410 420 TAGCAGVSYW GSVIIGGIAG ILVVYSVAFF DKIKIDDPVG AISVHLVNGV WGTLAVGFFN 430 440 450 460 470 480 MEKGLFYGGG INQLIIQIVG ILAIGAFTAI FSFVVWAILK QTMGIRVSGE EEMIGLDIGE 490 500 HGMEAYTGFV KETDSFGSAV SGATVPE

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome." Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S. DNA Res. 2:153-166(1995) [PubMed: 8590279] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27184 / PCC 6803 / N-1.

[2]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed: 8905231] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27184 / PCC 6803 / N-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000022 Genomic DNA. Translation: BAA10631.1.
PIR	S76687.
RefSeq	NP_442561.1. NC_000911.1.
3D structure databases
ProteinModelPortal	P54147.
ModBase	Search...
Protein-protein interaction databases
IntAct	P54147. 2 interactions.
STRING	P54147.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	952306.
GenomeReviews	Gene locus sll0108 in contig BA000022_GR.
KEGG	syn:sll0108.
NMPDR	fig|1148.1.peg.2662.
PATRIC	23842846. VBISynSp132158_2962.
Phylogenomic databases
eggNOG	COG0004.
HOGENOM	HBG677626.
OMA	NVCLYSI.
PhylomeDB	P54147.
ProtClustDB	CLSK2301927.
Enzyme and pathway databases
BioCyc	SSP1148:SLL0108-MONOMER.
Family and domain databases
InterPro	IPR001905. Ammonium_transpt. IPR018047. Ammonium_transpt_CS. IPR024041. NH4_transpt_AmtB-like. [Graphical view]
Gene3D	G3DSA:1.10.3430.10. G3DSA:1.10.3430.10. 1 hit.
PANTHER	PTHR11730. Ammonium_transpt. 1 hit.
Pfam	PF00909. Ammonium_transp. 1 hit. [Graphical view]
SUPFAM	SSF111352. RH_like_transpt. 1 hit.
TIGRFAMs	TIGR00836. Amt. 1 hit.
PROSITE	PS01219. AMMONIUM_TRANSP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y108_SYNY3

Accession

Primary (citable) accession number: P54147

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	October 1, 1996
Last modified:	January 25, 2012
This is version 74 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program