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Reviewed, UniProtKB/Swiss-Prot P54145 (AMT1_CAEEL)

Last modified November 24, 2009. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Putative ammonium transporter 1
Gene names
Name: amt-1
ORF Names: C05E11.4
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

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Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Function

Involved in the uptake of ammonia Probable.

Subcellular location

Membrane; Multi-pass membrane protein Probable.

Sequence similarities

Belongs to the ammonium transporter (TC 2.A.49) family. [View classification]

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Ontologies

Keywords
   Biological processAmmonia transport
Transport
   Cellular componentMembrane
   DomainTransmembrane
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processammonium transport

Inferred from electronic annotation. Source: UniProtKB-KW

transmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionammonium transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 534534Putative ammonium transporter 1
PRO_0000139751

Regions

Transmembrane31 – 5121 Potential
Transmembrane69 – 8921 Potential
Transmembrane115 – 13521 Potential
Transmembrane139 – 15921 Potential
Transmembrane184 – 20421 Potential
Transmembrane223 – 24321 Potential
Transmembrane263 – 28321 Potential
Transmembrane291 – 31121 Potential
Transmembrane318 – 33821 Potential
Transmembrane346 – 36621 Potential
Transmembrane401 – 42121 Potential

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Sequences

Sequence LengthMass (Da)Tools
P54145-1 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: C17CFE44E0DC3D05

FASTA53458,491
        10         20         30         40         50         60 
MTTPTNFTTE IDKLHAEITR LETGFYENVN SFFLCSMALI IFFMQCGFAY LEAGAVRSKN 

        70         80         90        100        110        120 
TTNILIKNLL DSCICIIGYW AIGWALAYGD SGEGVNLFVG HSQFFLSGFS DYPRFFFQYV 

       130        140        150        160        170        180 
FSATAATIVS GAVAERCEFI TYVTYCTVIS TFIYPVLTHW GWTENGWMAK GITSGIIDTK 

       190        200        210        220        230        240 
YDDFAGSGLV HLCGGSISFL AAWIMGPRIG KFPDDEDDES DEILGHSVPF TALGGFILMF 

       250        260        270        280        290        300 
GFLAFNGGSV ASISHAGDGH TVALAMINTI LSGAFAALIY LGVHYYQHGK WTLLLTINAC 

       310        320        330        340        350        360 
LSGMVAACAG CNKMEPWACI WVGLGAGLIY LAFSKLMIRL KIDDPLDAFA VHAGGGFWGL 

       370        380        390        400        410        420 
MSSSIISHGG VAYALADAVS GAKNSGDHLT QAFAQLGWQM ICALAIIAWS LGVMLPIFWI 

       430        440        450        460        470        480 
LKKTGKLRVS EEVEINGLDV FKHGEMAYPL RAYGHGWHDF ERANKIQAFS AKITVGEGKN 

       490        500        510        520        530 
TRIMKIHPEM SIEQLASVYD RSGNIIPMPK KSRTLFTNSA ERKMSQMMYD ENKM

« Hide

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

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Cross-references

Sequence databases

U53338 Genomic DNA. Translation: AAA96191.1.
PIRT15414.
RefSeqNP_508784.1.
UniGeneCel.11453

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblC05E11.4; C05E11.4; C05E11.4; Caenorhabditis elegans. [Genome view]
GeneID180729.
KEGGcel:C05E11.4.
NMPDRfig|6239.3.peg.23126.
UCSCC05E11.4. c. elegans.

Organism-specific databases

CTD180729.
WormBaseWBGene00000133. amt-1.
WormPepC05E11.4. CE06770. [WorfDB]

Phylogenomic databases

OMAAMINTIL

Gene expression databases

ArrayExpressP54145.

Family and domain databases

InterProIPR001905. Ammonium_transpt.
IPR018047. Ammonium_transpt_CS.
[Graphical view]
PANTHERPTHR11730. Ammonium_transpt. 1 hit.
PfamPF00909. Ammonium_transp. 1 hit.
[Graphical view]
TIGRFAMsTIGR00836. amt. 1 hit.
PROSITEPS01219. AMMONIUM_TRANSP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio910672.

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Entry information

Entry nameAMT1_CAEEL
AccessionPrimary (citable) accession number: P54145
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: November 24, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectCaenorhabditis annotation project

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Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents