Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P54049 (RL10_METJA) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Alternative name(s):
Acidic ribosomal protein P0 homolog
MjaL10
Gene names
Name:rpl10
Synonyms:rplP0
Ordered Locus Names:MJ0509
OrganismMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) [Reference proteome] [HAMAP]
Taxonomic identifier243232 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors Probable. HAMAP-Rule MF_00280

Subunit structure

Part of the 50S ribosomal subunit. Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Forms a heptameric L10(L12)2(L12)2(L12)2 complex, where L10 forms an elongated spine to which the L12 dimers bind in a sequential fashion Probable.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 33833850S ribosomal protein L10 HAMAP-Rule MF_00280
PRO_0000154793

Secondary structure

........................................ 338
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P54049 [UniParc].

Last modified July 15, 1998. Version 2.
Checksum: 63A6AFD357E3052D

FASTA33836,751
        10         20         30         40         50         60 
METKVKAHVA PWKIEEVKTL KGLIKSKPVV AIVDMMDVPA PQLQEIRDKI RDKVKLRMSR 

        70         80         90        100        110        120 
NTLIIRALKE AAEELNNPKL AELANYVERG AAILVTDMNP FKLYKLLEEN KSPAPVRGGQ 

       130        140        150        160        170        180 
IAPCDIKVEK GSTGMPPGPF LGELKSVGIP AAIEKGKIAI KEDKVVVKKG EVVSPKLAAV 

       190        200        210        220        230        240 
LDRLGIKPIK VGLNILAVYE DGIIYTPDVL KVDEEKLLAD IQAAYQNAFN LAFNTAYPAK 

       250        260        270        280        290        300 
EVLPFLIQKA FINARALSVE TAFVTKETAG DILAKAQAQA LALASKLPDE ALDEDIKAKL 

       310        320        330 
SSVEVSAAPA AEEEKEEEKK EEEKKEEDTG AAGLALLF 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L77117 Genomic DNA. Translation: AAB98499.1.
RefSeqNP_247485.1. NC_000909.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3JSYX-ray1.60A/B10-221[»]
ProteinModelPortalP54049.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243232.MJ0509.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB98499; AAB98499; MJ_0509.
GeneID1451371.
KEGGmja:MJ_0509.

Phylogenomic databases

eggNOGCOG0244.
KOK02864.
OMAWKKDEIE.
PhylomeDBP54049.

Family and domain databases

Gene3D1.10.10.380. 2 hits.
HAMAPMF_00280. Ribosomal_L10_arch.
InterProIPR022909. 50S_L10_arch.
IPR001790. Ribosomal_L10/acidic_P0.
IPR001813. Ribosomal_L10/L12.
IPR013522. Ribosomal_L10_N_arc.
[Graphical view]
PfamPF00428. Ribosomal_60s. 1 hit.
PF00466. Ribosomal_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP54049.

Entry information

Entry nameRL10_METJA
AccessionPrimary (citable) accession number: P54049
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 15, 1998
Last modified: July 9, 2014
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Methanococcus jannaschii

Methanococcus jannaschii: entries and gene names