Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P54049

- RL10_METJA

UniProt

P54049 - RL10_METJA

Protein

50S ribosomal protein L10

Gene

rpl10

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 2 (15 Jul 1998)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.Curated

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translational elongation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10UniRule annotation
    Alternative name(s):
    Acidic ribosomal protein P0 homologUniRule annotation
    MjaL10
    Gene namesi
    Name:rpl10UniRule annotation
    Synonyms:rplP0UniRule annotation
    Ordered Locus Names:MJ0509
    OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
    Taxonomic identifieri243232 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
    ProteomesiUP000000805: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 33833850S ribosomal protein L10PRO_0000154793Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Forms a heptameric L10(L12)2(L12)2(L12)2 complex, where L10 forms an elongated spine to which the L12 dimers bind in a sequential fashion Probable.Curated

    Protein-protein interaction databases

    STRINGi243232.MJ0509.

    Structurei

    Secondary structure

    1
    338
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi11 – 2616
    Beta strandi27 – 348
    Helixi40 – 5011
    Turni51 – 533
    Beta strandi54 – 585
    Helixi61 – 7414
    Helixi78 – 869
    Beta strandi89 – 9810
    Helixi100 – 10910
    Beta strandi112 – 1143
    Beta strandi126 – 1283
    Beta strandi130 – 1323
    Helixi140 – 1467
    Beta strandi151 – 1544
    Beta strandi157 – 1604
    Beta strandi164 – 1674
    Helixi175 – 1839
    Beta strandi189 – 1924
    Beta strandi194 – 2007
    Beta strandi203 – 2053
    Helixi207 – 2137

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3JSYX-ray1.60A/B10-221[»]
    ProteinModelPortaliP54049.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP54049.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0244.
    KOiK02864.
    OMAiWKKDEIE.
    PhylomeDBiP54049.

    Family and domain databases

    Gene3Di1.10.10.380. 2 hits.
    HAMAPiMF_00280. Ribosomal_L10_arch.
    InterProiIPR022909. 50S_L10_arch.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR001813. Ribosomal_L10/L12.
    IPR013522. Ribosomal_L10_N_arc.
    [Graphical view]
    PfamiPF00428. Ribosomal_60s. 1 hit.
    PF00466. Ribosomal_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P54049-1 [UniParc]FASTAAdd to Basket

    « Hide

    METKVKAHVA PWKIEEVKTL KGLIKSKPVV AIVDMMDVPA PQLQEIRDKI    50
    RDKVKLRMSR NTLIIRALKE AAEELNNPKL AELANYVERG AAILVTDMNP 100
    FKLYKLLEEN KSPAPVRGGQ IAPCDIKVEK GSTGMPPGPF LGELKSVGIP 150
    AAIEKGKIAI KEDKVVVKKG EVVSPKLAAV LDRLGIKPIK VGLNILAVYE 200
    DGIIYTPDVL KVDEEKLLAD IQAAYQNAFN LAFNTAYPAK EVLPFLIQKA 250
    FINARALSVE TAFVTKETAG DILAKAQAQA LALASKLPDE ALDEDIKAKL 300
    SSVEVSAAPA AEEEKEEEKK EEEKKEEDTG AAGLALLF 338
    Length:338
    Mass (Da):36,751
    Last modified:July 15, 1998 - v2
    Checksum:i63A6AFD357E3052D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L77117 Genomic DNA. Translation: AAB98499.1.
    RefSeqiNP_247485.1. NC_000909.1.
    WP_010870010.1. NC_000909.1.

    Genome annotation databases

    EnsemblBacteriaiAAB98499; AAB98499; MJ_0509.
    GeneIDi1451371.
    KEGGimja:MJ_0509.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L77117 Genomic DNA. Translation: AAB98499.1 .
    RefSeqi NP_247485.1. NC_000909.1.
    WP_010870010.1. NC_000909.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3JSY X-ray 1.60 A/B 10-221 [» ]
    ProteinModelPortali P54049.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243232.MJ0509.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB98499 ; AAB98499 ; MJ_0509 .
    GeneIDi 1451371.
    KEGGi mja:MJ_0509.

    Phylogenomic databases

    eggNOGi COG0244.
    KOi K02864.
    OMAi WKKDEIE.
    PhylomeDBi P54049.

    Miscellaneous databases

    EvolutionaryTracei P54049.

    Family and domain databases

    Gene3Di 1.10.10.380. 2 hits.
    HAMAPi MF_00280. Ribosomal_L10_arch.
    InterProi IPR022909. 50S_L10_arch.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR001813. Ribosomal_L10/L12.
    IPR013522. Ribosomal_L10_N_arc.
    [Graphical view ]
    Pfami PF00428. Ribosomal_60s. 1 hit.
    PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.
    2. "Structure of a two-domain N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii reveals a specific piece of the archaeal ribosomal stalk."
      Kravchenko O., Mitroshin I., Nikonov S., Piendl W., Garber M.
      J. Mol. Biol. 399:214-220(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 10-221.

    Entry informationi

    Entry nameiRL10_METJA
    AccessioniPrimary (citable) accession number: P54049
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: July 15, 1998
    Last modified: October 1, 2014
    This is version 78 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. Methanococcus jannaschii
      Methanococcus jannaschii: entries and gene names
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    3. Ribosomal proteins
      Ribosomal proteins families and list of entries
    4. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3