P54029 (RS10_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S10

Gene names

Name:	rps10
Ordered Locus Names:	MJ0322

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) [Reference proteome] [HAMAP]

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus › Methanocaldococcus jannaschii

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Involved in the binding of tRNA to the ribosomes By similarity. HAMAP-Rule MF_00508
Subunit structure	Part of the 30S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein S10P family.
Sequence caution	The sequence AAB98306.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 101	101	30S ribosomal protein S10 HAMAP-Rule MF_00508		PRO_0000146646

Sequences

	Sequence		Length	Mass (Da)
	P54029 [UniParc]. Last modified December 13, 2001. Version 2. Checksum: 7676C40BA48DAF07	FASTA	101	11,673
	10 20 30 40 50 60 MQRARIKLSS TDHKVLDEIC RQIKEIAEKT GVDISGPIPL PTKVLRVVTR KSPDGEGSST 70 80 90 100 FDRWTMKIHK RLIDIDADER ALRHIMKIRI PDNVQIEIQF K

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98306.1. Different initiation.
PIR	C64340.
RefSeq	NP_247295.1. NC_000909.1.
3D structure databases
ProteinModelPortal	P54029.
ModBase	Search...
Protein-protein interaction databases
STRING	243232.MJ0322.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB98306; AAB98306; MJ_0322.
GeneID	1451177.
KEGG	mja:MJ_0322.
Phylogenomic databases
eggNOG	COG0051.
KO	K02946.
OMA	YEMRIHK.
ProtClustDB	PRK12271.
Family and domain databases
Gene3D	3.30.70.600. 1 hit.
HAMAP	MF_00508. Ribosomal_S10.
InterPro	IPR001848. Ribosomal_S10. IPR018268. Ribosomal_S10_CS. IPR005729. Ribosomal_S10_euk/arc. [Graphical view]
PANTHER	PTHR11700. PTHR11700. 1 hit.
Pfam	PF00338. Ribosomal_S10. 1 hit. [Graphical view]
PRINTS	PR00971. RIBOSOMALS10.
SUPFAM	SSF54999. Ribosomal_S10. 1 hit.
TIGRFAMs	TIGR01046. S10_Arc_S20_Euk. 1 hit.
PROSITE	PS00361. RIBOSOMAL_S10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS10_METJA

Accession

Primary (citable) accession number: P54029

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	December 13, 2001
Last modified:	May 1, 2013
This is version 75 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program