P54013 (RL21_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L21e

Gene names

Name:	rpl21e
Ordered Locus Names:	MJ0040

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L21e family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 98	98	50S ribosomal protein L21e HAMAP MF_00369		PRO_0000149689

Sequences

	Sequence		Length	Mass (Da)
	P54013 [UniParc]. Last modified July 15, 1998. Version 2. Checksum: 22C9DC88DF7583A3	FASTA	98	11,329
	10 20 30 40 50 60 MVQMSEGFRR KTRKKLSKHP RERGLYPITR ALREFKEGEY VHIVIDPSVH KGMPHPRFHG 70 80 90 RTGIVVGKQG RAFIVKVRDG GKYKQIIAYP QHLRPATA

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98021.1.
RefSeq	NP_247003.1. NC_000909.1.
3D structure databases
ProteinModelPortal	P54013.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1450878.
GenomeReviews	Gene locus MJ0040 in contig L77117_GR.
KEGG	mja:MJ_0040.
NMPDR	fig|243232.1.peg.40.
TIGR	MJ0040.
Phylogenomic databases
HOGENOM	HBG497499.
OMA	PRFHGRT.
ProtClustDB	PRK04306.
Enzyme and pathway databases
BioCyc	MJAN243232:MJ_0040-MONOMER.
Family and domain databases
HAMAP	MF_00369. Ribosomal_L21e. [Tree]
InterPro	IPR001147. Ribosomal_L21e. IPR022856. Ribosomal_L21e_arc. IPR018259. Ribosomal_L21e_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
KO	K02889.
PANTHER	PTHR20981. Ribosomal_L21e. 1 hit.
Pfam	PF01157. Ribosomal_L21e. 1 hit. [Graphical view]
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
PROSITE	PS01171. RIBOSOMAL_L21E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL21_METJA

Accession

Primary (citable) accession number: P54013

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	July 15, 1998
Last modified:	November 16, 2011
This is version 63 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program