Reviewed, UniProtKB/Swiss-Prot P54013 (RL21_METJA)

Names and origin

Protein names

Recommended name:
    50S ribosomal protein L21e

Gene names

Name:	rpl21e
Ordered Locus Names:	MJ0040

Organism

Methanocaldococcus jannaschii (Methanococcus jannaschii) [Complete proteome] [HAMAP]

Taxonomic identifier

2190 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L21e family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 98	98	50S ribosomal protein L21e HAMAP MF_00369		PRO_0000149689

Sequences

	Sequence		Length	Mass (Da)
	P54013-1 [UniParc]. Last modified July 15, 1998. Version 2. Checksum: 22C9DC88DF7583A3	FASTA	98	11,329
	10 20 30 40 50 60 MVQMSEGFRR KTRKKLSKHP RERGLYPITR ALREFKEGEY VHIVIDPSVH KGMPHPRFHG 70 80 90 RTGIVVGKQG RAFIVKVRDG GKYKQIIAYP QHLRPATA

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBLGenBankDDBJ	L77117 Genomic DNA. Translation: AAB98021.1.
RefSeq	NP_247003.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1450878.
GenomeReviews	Gene locus MJ0040 in contig L77117_GR.
KEGG	mja:MJ0040.
NMPDR	fig|243232.1.peg.40.
TIGR	MJ0040.
Phylogenomic databases
HOGENOM	HBG497499.
OMA	RFHGKTG.
Family and domain databases
HAMAP	MF_00369. [Tree]
InterPro	IPR001147. Ribosomal_L21e. IPR018259. Ribosomal_L21e_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
PANTHER	PTHR20981. Ribosomal_L21e. 1 hit.
Pfam	PF01157. Ribosomal_L21e. 1 hit. [Graphical view]
PROSITE	PS01171. RIBOSOMAL_L21E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL21_METJA

Accession

Primary (citable) accession number: P54013

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	July 15, 1998
Last modified:	December 15, 2009
This is version 53 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)