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P53934

- YNJ2_YEAST

UniProt

P53934 - YNJ2_YEAST

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Protein

UPF0586 protein YNL092W

Gene

YNL092W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. S-adenosylmethionine-dependent methyltransferase activity Source: SGD

GO - Biological processi

  1. methylation Source: GOC
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-33120-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0586 protein YNL092W
Gene namesi
Ordered Locus Names:YNL092W
ORF Names:N2227
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XIV

Organism-specific databases

CYGDiYNL092w.
SGDiS000005036. YNL092W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 400400UPF0586 protein YNL092WPRO_0000203441Add
BLAST

Proteomic databases

PaxDbiP53934.
PRIDEiP53934.

Expressioni

Gene expression databases

GenevestigatoriP53934.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself1EBI-28794,EBI-28794
BZZ1P388221EBI-28794,EBI-3889
FIP1P459761EBI-28794,EBI-6940
JJJ3P471381EBI-28794,EBI-25576
KGD2P192621EBI-28794,EBI-12464
SCD5P347581EBI-28794,EBI-16685
YAP6Q039351EBI-28794,EBI-37603
YML037CQ037031EBI-28794,EBI-27772

Protein-protein interaction databases

BioGridi35732. 19 interactions.
DIPiDIP-1880N.
IntActiP53934. 10 interactions.
MINTiMINT-391242.
STRINGi4932.YNL092W.

Structurei

3D structure databases

ProteinModelPortaliP53934.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0586 family.Curated

Phylogenomic databases

eggNOGiNOG323736.
GeneTreeiENSGT00390000005323.
HOGENOMiHOG000204444.
InParanoidiP53934.
OMAiVVANATH.
OrthoDBiEOG7ZKSMD.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR012901. N2227.
IPR029063. SAM-dependent_MTases-like.
[Graphical view]
PfamiPF07942. N2227. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.

Sequencei

Sequence statusi: Complete.

P53934-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDENEFDNQR ENKAVARVII SFLKYEEYAL KEIYNLRVKK WASISDRQKD
60 70 80 90 100
MVPNYTKYLA NLKAAIIENG KFFRSVAEYA LQSISFEPGE IVQPNDLDMS
110 120 130 140 150
KTCSLLTQVY REWSAEAISE RNCLNSRLVP FLKTLSPPKA DILIPGCGTG
160 170 180 190 200
RLLVDLSRMG YNCEGNEFSY HMLLVSQYML NAGLLQNQII IYPFIHCFSH
210 220 230 240 250
WKKIEDQLSP IKVPDIEAWS SNKGMGSMSI CAGSFVDCYG RNQGTKISSH
260 270 280 290 300
YTFSRRMQLS RAKAENSKDV VVTNFFIDTG SNILDYLDTI GHVLKPGGIW
310 320 330 340 350
CNFGPLLYHF ENDHGVETTY EVNPYSGFQD KINDYTPLMG LELSSDDIIS
360 370 380 390 400
IATNHLDFEL IRRESGILCG YGRYAGPESC AMPGYMCHYW ILKSNPTNES
Length:400
Mass (Da):45,497
Last modified:October 1, 1996 - v1
Checksum:i6B6C051891F075EE
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti42 – 421A → E in strain: SK1.
Natural varianti154 – 1541V → M in strain: SK1.
Natural varianti317 – 3171E → D in strain: SK1.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X85811 Genomic DNA. Translation: CAA59825.1.
DQ115393 Genomic DNA. Translation: AAZ22516.1.
Z71368 Genomic DNA. Translation: CAA95968.1.
BK006947 Genomic DNA. Translation: DAA10454.1.
PIRiS52733.
RefSeqiNP_014307.1. NM_001182930.1.

Genome annotation databases

EnsemblFungiiYNL092W; YNL092W; YNL092W.
GeneIDi855632.
KEGGisce:YNL092W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X85811 Genomic DNA. Translation: CAA59825.1 .
DQ115393 Genomic DNA. Translation: AAZ22516.1 .
Z71368 Genomic DNA. Translation: CAA95968.1 .
BK006947 Genomic DNA. Translation: DAA10454.1 .
PIRi S52733.
RefSeqi NP_014307.1. NM_001182930.1.

3D structure databases

ProteinModelPortali P53934.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 35732. 19 interactions.
DIPi DIP-1880N.
IntActi P53934. 10 interactions.
MINTi MINT-391242.
STRINGi 4932.YNL092W.

Proteomic databases

PaxDbi P53934.
PRIDEi P53934.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YNL092W ; YNL092W ; YNL092W .
GeneIDi 855632.
KEGGi sce:YNL092W.

Organism-specific databases

CYGDi YNL092w.
SGDi S000005036. YNL092W.

Phylogenomic databases

eggNOGi NOG323736.
GeneTreei ENSGT00390000005323.
HOGENOMi HOG000204444.
InParanoidi P53934.
OMAi VVANATH.
OrthoDBi EOG7ZKSMD.

Enzyme and pathway databases

BioCyci YEAST:G3O-33120-MONOMER.

Miscellaneous databases

NextBioi 979845.

Gene expression databases

Genevestigatori P53934.

Family and domain databases

Gene3Di 3.40.50.150. 2 hits.
InterProi IPR012901. N2227.
IPR029063. SAM-dependent_MTases-like.
[Graphical view ]
Pfami PF07942. N2227. 1 hit.
[Graphical view ]
SUPFAMi SSF53335. SSF53335. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of a 14.2 kb fragment of Saccharomyces cerevisiae chromosome XIV that includes the ypt53, tRNALeu and gsr m2 genes and four new open reading frames."
    Garcia-Cantalejo J.M., Boskovic J., Jimenez A.
    Yeast 12:599-608(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 96604 / S288c / FY1679.
  2. "Quantitative trait loci mapped to single-nucleotide resolution in yeast."
    Deutschbauer A.M., Davis R.W.
    Nat. Genet. 37:1333-1340(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: SK1.
  3. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
    Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
    , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
    Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYNJ2_YEAST
AccessioniPrimary (citable) accession number: P53934
Secondary accession number(s): D6W188, Q45TZ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 29, 2014
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 952 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XIV
    Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

External Data

Dasty 3