P53839 (GOR1_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 97.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Glyoxylate reductase 1 EC=1.1.1.26 | ||||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 350 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Reversibly reduces glyoxylate to glycolate. Ref.8 |
| Catalytic activity | Glycolate + NAD+ = glyoxylate + NADH. |
| Subcellular location | |
| Miscellaneous | Present with 3280 molecules/cell in log phase SD medium. Ref.5 |
| Sequence similarities | Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Mitochondrion Nucleus |
| Ligand | NAD |
| Molecular function | Oxidoreductase |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | glyoxylate catabolic process Inferred from mutant phenotype Ref.8. Source: SGD |
| Cellular component | mitochondrion Inferred from direct assay Ref.6Ref.7. Source: SGD nucleusInferred from direct assay Ref.4. Source: SGD |
| Molecular function | NAD binding Inferred from electronic annotation. Source: InterPro glyoxylate reductase activityInferred from mutant phenotype Ref.8. Source: SGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 350 | 350 | Glyoxylate reductase 1 | PRO_0000076040 | |||||
Regions | |||||||||
| Nucleotide binding | 173 – 174 | 2 | NAD By similarity | ||||||
| Nucleotide binding | 252 – 254 | 3 | NAD By similarity | ||||||
| Nucleotide binding | 301 – 304 | 4 | NAD By similarity | ||||||
Sites | |||||||||
| Active site | 254 | 1 | By similarity | ||||||
| Active site | 283 | 1 | By similarity | ||||||
| Active site | 301 | 1 | Proton donor By similarity | ||||||
| Binding site | 278 | 1 | NAD By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 31 | 1 | Phosphothreonine Ref.9 | ||||||
| Modified residue | 35 | 1 | Phosphoserine Ref.9 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications." Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J. Hani J.Nature 387:93-98(1997) [PubMed: 9169873] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [2] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [3] | "Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae." Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. LaBaer J.Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [4] | "Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed: 14562095] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. |
| [5] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [6] | "The proteome of Saccharomyces cerevisiae mitochondria." Sickmann A., Reinders J., Wagner Y., Joppich C., Zahedi R.P., Meyer H.E., Schoenfisch B., Perschil I., Chacinska A., Guiard B., Rehling P., Pfanner N., Meisinger C. Proc. Natl. Acad. Sci. U.S.A. 100:13207-13212(2003) [PubMed: 14576278] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. Strain: ATCC 76625 / YPH499. |
| [7] | "Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics." Reinders J., Zahedi R.P., Pfanner N., Meisinger C., Sickmann A. J. Proteome Res. 5:1543-1554(2006) [PubMed: 16823961] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [8] | "The ORF YNL274c (GOR1) codes for glyoxylate reductase in Saccharomyces cerevisiae." Rintala E., Pitkanen J.P., Vehkomaki M.L., Penttila M., Ruohonen L. Yeast 24:129-136(2007) [PubMed: 17173333] [Abstract] Cited for: FUNCTION. |
| [9] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-31 AND SER-35, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z71550 Genomic DNA. Translation: CAA96182.1. AY692660 Genomic DNA. Translation: AAT92679.1. BK006947 Genomic DNA. Translation: DAA10286.1. |
| PIR | S63248. |
| RefSeq | NP_014125.1. NM_001183112.1. |
3D structure databases | |
| ProteinModelPortal | P53839. |
| SMR | P53839. Positions 4-348. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P53839. 9 interactions. |
| MINT | MINT-2493973. |
| STRING | P53839. |
Proteomic databases | |
| PeptideAtlas | P53839. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YNL274C; YNL274C; YNL274C. |
| GeneID | 855447. |
| KEGG | sce:YNL274C. |
| NMPDR | fig|4932.3.peg.5190. |
Organism-specific databases | |
| CYGD | YNL274c. |
| SGD | S000005218. GOR1. |
Phylogenomic databases | |
| eggNOG | fuNOG04855. |
| GeneTree | EFGT00050000001276. |
| HOGENOM | HBG731446. |
| OMA | MGTHSVE. |
| OrthoDB | EOG4MWCG7. |
Gene expression databases | |
| ArrayExpress | P53839. |
| Genevestigator | P53839. |
| GermOnline | YNL274C. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR006139. D-isomer_2_OHA_DH_cat_dom. IPR006140. D-isomer_2_OHA_DH_NAD-bd. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 2 hits. |
| Pfam | PF00389. 2-Hacid_dh. 1 hit. PF02826. 2-Hacid_dh_C. 1 hit. [Graphical view] |
| PROSITE | PS00065. D_2_HYDROXYACID_DH_1. 1 hit. PS00670. D_2_HYDROXYACID_DH_2. 1 hit. PS00671. D_2_HYDROXYACID_DH_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 979349. |
Entry information
| Entry name | GOR1_YEAST | ||||||||
| Accession | Primary (citable) accession number: P53839 Secondary accession number(s): D6W0S0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome XIV Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

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