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P53762

- ARNT_MOUSE

UniProt

P53762 - ARNT_MOUSE

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Protein

Aryl hydrocarbon receptor nuclear translocator

Gene
Arnt
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Required for activity of the Ah (dioxin) receptor. This protein is required for the ligand-binding subunit to translocate from the cytosol to the nucleus after ligand binding. The complex then initiates transcription of genes involved in the activation of PAH procarcinogens. The heterodimer with HIF1A or EPAS1/HIF2A functions as a transcriptional regulator of the adaptive response to hypoxia By similarity.

GO - Molecular functioni

  1. aryl hydrocarbon receptor activity Source: MGI
  2. DNA binding Source: MGI
  3. enhancer binding Source: MGI
  4. protein binding Source: IntAct
  5. protein heterodimerization activity Source: MGI
  6. RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity Source: Ensembl
  7. sequence-specific DNA binding Source: Ensembl
  8. sequence-specific DNA binding transcription factor activity Source: MGI
  9. transcription coactivator activity Source: MGI
  10. transcription factor binding transcription factor activity Source: MGI

GO - Biological processi

  1. cell differentiation Source: MGI
  2. embryonic placenta development Source: MGI
  3. intracellular receptor signaling pathway Source: GOC
  4. positive regulation of hormone biosynthetic process Source: Ensembl
  5. positive regulation of protein sumoylation Source: BHF-UCL
  6. positive regulation of transcription, DNA-templated Source: MGI
  7. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  8. positive regulation vascular endothelial growth factor production Source: Ensembl
  9. regulation of transcription from RNA polymerase II promoter in response to oxidative stress Source: Ensembl
  10. response to hypoxia Source: MGI
  11. response to toxic substance Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

ReactomeiREACT_199107. Regulation of gene expression by Hypoxia-inducible Factor.

Names & Taxonomyi

Protein namesi
Recommended name:
Aryl hydrocarbon receptor nuclear translocator
Short name:
ARNT protein
Alternative name(s):
Dioxin receptor, nuclear translocator
Hypoxia-inducible factor 1-beta
Short name:
HIF-1-beta
Short name:
HIF1-beta
Gene namesi
Name:Arnt
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:88071. Arnt.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: MGI
  2. nucleus Source: MGI
  3. transcription factor complex Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 791790Aryl hydrocarbon receptor nuclear translocatorPRO_0000127119Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine By similarity
Modified residuei77 – 771Phosphoserine By similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PRIDEiP53762.

PTM databases

PhosphoSiteiP53762.

Expressioni

Tissue specificityi

Ubiquitous.

Gene expression databases

ArrayExpressiP53762.
BgeeiP53762.
CleanExiMM_ARNT.
GenevestigatoriP53762.

Interactioni

Subunit structurei

Heterodimer with HIF1A By similarity. Efficient DNA binding requires dimerization with another bHLH protein. Forms a heterodimer with AHR, AHRR, HIF1A and EPAS1/HIF2A as well as with other bHLH proteins. Interacts with NOCA7 and TACC3.2 Publications

Binary interactionsi

WithEntry#Exp.IntActNotes
Sim1Q610452EBI-78852,EBI-78890

Protein-protein interaction databases

BioGridi198205. 2 interactions.
DIPiDIP-280N.
IntActiP53762. 7 interactions.

Structurei

3D structure databases

ProteinModelPortaliP53762.
SMRiP53762. Positions 90-465.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini89 – 14254bHLHAdd
BLAST
Domaini161 – 23575PAS 1Add
BLAST
Domaini349 – 41971PAS 2Add
BLAST
Domaini424 – 46744PACAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi99 – 1024Poly-Arg
Compositional biasi503 – 5075Poly-Gln
Compositional biasi740 – 7434Poly-Ser

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiNOG293303.
GeneTreeiENSGT00650000092935.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.
InParanoidiQ921F3.
KOiK09097.
OMAiIVEFCHP.
OrthoDBiEOG7V1FQ8.
TreeFamiTF319983.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform Long (identifier: P53762-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MAATTANPEM TSDVPSLGPT IASGNPGPGI QGGGAVVQRA IKRRSGLDFD    50
DEVEVNTKFL RCDDDQMCND KERFARSDDE QSSADKERLA RENHSEIERR 100
RRNKMTAYIT ELSDMVPTCS ALARKPDKLT ILRMAVSHMK SLRGTGNTST 150
DGSYKPSFLT DQELKHLILE AADGFLFIVS CETGRVVYVS DSVTPVLNQP 200
QSEWFGSTLY DQVHPDDVDK LREQLSTSEN ALTGRVLDLK TGTVKKEGQQ 250
SSMRMCMGSR RSFICRMRCG TSSVDPVSMN RLSFLRNRCR NGLGSVKEGE 300
PHFVVVHCTG YIKAWPPAGV SLPDDDPEAG QGSKFCLVAI GRLQVTSSPN 350
CTDMSNICQP TEFISRHNIE GIFTFVDHRC VATVGYQPQE LLGKNIVEFC 400
HPEDQQLLRD SFQQVVKLKG QVLSVMFRFR SKTREWLWMR TSSFTFQNPY 450
SDEIEYIICT NTNVKNSSQE PRPTLSNTIP RSQLGPTANL SLEMGTGQLP 500
SRQQQQQHTE LDMVPGRDGL ASYNHSQVSV QPVASAGSEH SKPLEKSEGL 550
FAQDRDPRFP EIYPSITADQ SKGISSSTVP ATQQLFSQGS SFPPNPRPAE 600
NFRNSGLTPP VTIVQPSSSA GQILAQISRH SNPAQGSAPT WTSSSRPGFA 650
AQQVPTQATA KTRSSQFGVN NFQTSSSFSA MSLPGAPTAS SGTAAYPALP 700
NRGSNFPPET GQTTGQFQAR TAEGVGVWPQ WQGQQPHHRS SSSEQHVQQT 750
QAQAPSQPEV FQEMLSMLGD QSNTYNNEEF PDLTMFPPFS E 791
Length:791
Mass (Da):86,963
Last modified:July 27, 2011 - v3
Checksum:iBDEC0991CD57D402
GO
Isoform Short (identifier: P53762-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     77-100: SDDEQSSADKERLARENHSEIERR → TKFL

Show »
Length:771
Mass (Da):84,613
Checksum:i1577F629BAE8F38B
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei77 – 10024SDDEQ…EIERR → TKFL in isoform Short. VSP_002093Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti411 – 4111S → T in AAA61732. 1 Publication
Sequence conflicti534 – 5341A → R in AAA61732. 1 Publication
Sequence conflicti644 – 6441S → T in AAA56717. 1 Publication
Sequence conflicti650 – 6501A → C in AAA61732. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U10325 mRNA. Translation: AAA56717.1.
U14333 mRNA. Translation: AAA61732.1.
AK153355 mRNA. Translation: BAE31928.1.
CH466620 Genomic DNA. Translation: EDL38816.1.
BC012870 mRNA. Translation: AAH12870.1.
CCDSiCCDS17614.1. [P53762-1]
PIRiA55448.
A56241.
RefSeqiNP_001032826.1. NM_001037737.2. [P53762-1]
UniGeneiMm.250265.

Genome annotation databases

EnsembliENSMUST00000102749; ENSMUSP00000099810; ENSMUSG00000015522. [P53762-1]
GeneIDi11863.
KEGGimmu:11863.
UCSCiuc008qjr.2. mouse. [P53762-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U10325 mRNA. Translation: AAA56717.1 .
U14333 mRNA. Translation: AAA61732.1 .
AK153355 mRNA. Translation: BAE31928.1 .
CH466620 Genomic DNA. Translation: EDL38816.1 .
BC012870 mRNA. Translation: AAH12870.1 .
CCDSi CCDS17614.1. [P53762-1 ]
PIRi A55448.
A56241.
RefSeqi NP_001032826.1. NM_001037737.2. [P53762-1 ]
UniGenei Mm.250265.

3D structure databases

ProteinModelPortali P53762.
SMRi P53762. Positions 90-465.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 198205. 2 interactions.
DIPi DIP-280N.
IntActi P53762. 7 interactions.

PTM databases

PhosphoSitei P53762.

Proteomic databases

PRIDEi P53762.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000102749 ; ENSMUSP00000099810 ; ENSMUSG00000015522 . [P53762-1 ]
GeneIDi 11863.
KEGGi mmu:11863.
UCSCi uc008qjr.2. mouse. [P53762-1 ]

Organism-specific databases

CTDi 405.
MGIi MGI:88071. Arnt.

Phylogenomic databases

eggNOGi NOG293303.
GeneTreei ENSGT00650000092935.
HOGENOMi HOG000234380.
HOVERGENi HBG000164.
InParanoidi Q921F3.
KOi K09097.
OMAi IVEFCHP.
OrthoDBi EOG7V1FQ8.
TreeFami TF319983.

Enzyme and pathway databases

Reactomei REACT_199107. Regulation of gene expression by Hypoxia-inducible Factor.

Miscellaneous databases

ChiTaRSi ARNT. mouse.
NextBioi 279865.
PROi P53762.
SOURCEi Search...

Gene expression databases

ArrayExpressi P53762.
Bgeei P53762.
CleanExi MM_ARNT.
Genevestigatori P53762.

Family and domain databases

Gene3Di 4.10.280.10. 1 hit.
InterProi IPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view ]
Pfami PF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view ]
PRINTSi PR00785. NCTRNSLOCATR.
SMARTi SM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view ]
SUPFAMi SSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsi TIGR00229. sensory_box. 1 hit.
PROSITEi PS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of functional domains of the aryl hydrocarbon receptor nuclear translocator protein (ARNT)."
    Reisz-Porszasz S., Probst M.R., Fukunaga B.N., Hankinson O.
    Mol. Cell. Biol. 14:6075-6086(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM LONG).
    Strain: C57BL/6.
    Tissue: Liver.
  2. "Transcriptional activation function of the mouse Ah receptor nuclear translocator."
    Li H., Dong L., Whitlock J.P. Jr.
    J. Biol. Chem. 269:28098-28105(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM SHORT).
    Strain: C57BL/6.
  3. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  4. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Mammary tumor.
  6. "Identification of a novel mechanism of regulation of Ah (dioxin) receptor function."
    Mimura J., Ema M., Sogawa K., Fujii-Kuriyama Y.
    Genes Dev. 13:20-25(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH AHRR.
  7. "Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development."
    Sadek C.M., Jalaguier S., Feeney E.P., Aitola M., Damdimopoulos A.E., Pelto-Huikko M., Gustafsson J.-A.
    Mech. Dev. 97:13-26(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH TACC3.

Entry informationi

Entry nameiARNT_MOUSE
AccessioniPrimary (citable) accession number: P53762
Secondary accession number(s): Q60661, Q921F3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 133 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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