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Protein

Uncharacterized RNA-binding protein YGR250C

Gene

YGR250C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 1910 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

  • RNA binding Source: SGD

Keywordsi

Molecular functionRNA-binding

Enzyme and pathway databases

BioCyciYEAST:G3O-30923-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized RNA-binding protein YGR250C
Gene namesi
Ordered Locus Names:YGR250C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi

Organism-specific databases

EuPathDBiFungiDB:YGR250C
SGDiS000003482 YGR250C

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000820301 – 781Uncharacterized RNA-binding protein YGR250CAdd BLAST781

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei29PhosphoserineCombined sources1
Modified residuei433PhosphoserineCombined sources1
Modified residuei435PhosphoserineCombined sources1
Modified residuei482PhosphoserineCombined sources1
Modified residuei485PhosphoserineCombined sources1
Modified residuei486PhosphothreonineCombined sources1
Modified residuei501PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP53316
PaxDbiP53316
PRIDEiP53316

PTM databases

iPTMnetiP53316

Interactioni

Subunit structurei

Interacts with RBG1.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
SGN1P405615EBI-23586,EBI-25362

Protein-protein interaction databases

BioGridi33501, 97 interactors
DIPiDIP-5559N
IntActiP53316, 15 interactors
MINTiP53316
STRINGi4932.YGR250C

Structurei

3D structure databases

ProteinModelPortaliP53316
SMRiP53316
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini195 – 273RRM 1PROSITE-ProRule annotationAdd BLAST79
Domaini295 – 418RRM 2PROSITE-ProRule annotationAdd BLAST124
Domaini540 – 638RRM 3PROSITE-ProRule annotationAdd BLAST99

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000142071
InParanoidiP53316
OMAiELNGNLM
OrthoDBiEOG092C0RD0

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SUPFAMiSSF54928 SSF54928, 5 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

P53316-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIAEEPSDE VISSGPEDTD ICSQQTSASA EAGDQSIKIE RKTSTGLQLE
60 70 80 90 100
QLANTNLLTI RIKWQLQEEE DDHCNSRITD QIMDTIQHYK GISVNNSDTE
110 120 130 140 150
TYEFLPDTRR LQVLEQNKDI YLYEHGSQEY EKSYKDNEEE DDWRYDTVLQ
160 170 180 190 200
AQFKYPKSLE NACTDISELL KSEPIGQHID KWSIGVNKHA LTYPGNIFVG
210 220 230 240 250
GIAKSLSIGE LSFLFSKYGP ILSMKLIYDK TKGEPNGYGF ISYPLGSQAS
260 270 280 290 300
LCIKELNGRT VNGSTLFINY HVERKERERI HWDHVKENNN DDNFRCLFIG
310 320 330 340 350
NLPYHNPEKV ETLITPKEVI EVIKKELSKK FPDFDIISYY FPKRSNTRSS
360 370 380 390 400
SSVSFNEEGS VESNKSSNNT NGNAQDEDML KGYGFIKLIN HEQALAAIET
410 420 430 440 450
FNGFMWHGNR LVVNKAVQHK VYNNHNSHDR HPSISNHNDM EVLEFANNPM
460 470 480 490 500
YDYNNYTYDR YYFNNNKNGN SNDTSNVRYF DSVRSTPVAE KMDLFYPQRE
510 520 530 540 550
SFSEGRGQRV PRFMGNKFDM YQYPSTSYSL PIPMSNQQES NLYVKHIPLS
560 570 580 590 600
WTDEDLYDFY KSFGEIISVK VITVGGSKNK YRQQSNDSSS DNDLPVGSSR
610 620 630 640 650
GYGFVSFESP LDAAKAILNT DGYQVSKDQV LSVSFAQKRG NLSSSDDDDQ
660 670 680 690 700
SQTDNSSKFQ NFQPHNDYHK AYPTKYNKKF INALMTQNQS QQQVSRENYF
710 720 730 740 750
IPLQYPNTNT KPVNSYNLIS ANQNNANWMM PMFPSFGFIP QVPPVPYIIP
760 770 780
PQNPAANHIP IMANGSNEEE EFSSGDYSMD Y
Length:781
Mass (Da):89,513
Last modified:October 1, 1996 - v1
Checksum:iC2CA1CBF5F6D395B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73035 Genomic DNA Translation: CAA97279.1
BK006941 Genomic DNA Translation: DAA08341.1
PIRiS64576
RefSeqiNP_011766.3, NM_001181379.3

Genome annotation databases

EnsemblFungiiYGR250C; YGR250C; YGR250C
GeneIDi853165
KEGGisce:YGR250C

Entry informationi

Entry nameiYG5B_YEAST
AccessioniPrimary (citable) accession number: P53316
Secondary accession number(s): D6VV30
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: May 23, 2018
This is version 152 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome VII
    Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

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