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Protein

Mitochondrial 37S ribosomal protein S27

Gene

RSM27

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: SGD

GO - Biological processi

  1. mitochondrial translation Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-30897-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Mitochondrial 37S ribosomal protein S27
Gene namesi
Name:RSM27
Ordered Locus Names:YGR215W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome VII

Organism-specific databases

CYGDiYGR215w.
SGDiS000003447. RSM27.

Subcellular locationi

Mitochondrion 3 Publications

GO - Cellular componenti

  1. mitochondrial small ribosomal subunit Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110Mitochondrial 37S ribosomal protein S27PRO_0000202847Add
BLAST

Proteomic databases

MaxQBiP53305.
PaxDbiP53305.
PeptideAtlasiP53305.

Expressioni

Gene expression databases

GenevestigatoriP53305.

Interactioni

Subunit structurei

Component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S).2 Publications

Protein-protein interaction databases

BioGridi33468. 34 interactions.
DIPiDIP-5606N.
IntActiP53305. 3 interactions.
MINTiMINT-503149.
STRINGi4932.YGR215W.

Structurei

3D structure databases

ProteinModelPortaliP53305.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi103 – 1108Poly-Lys

Phylogenomic databases

eggNOGiNOG294549.
HOGENOMiHOG000159261.
InParanoidiP53305.
OMAiTAYNPTS.
OrthoDBiEOG7Q8D20.

Family and domain databases

InterProiIPR013219. Ribosomal_S27/S33_mit.
[Graphical view]
PfamiPF08293. MRP-S33. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P53305-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVPKARLLK VAELSAKIFD QNFNPSGIRT GSKILNERLK GPSVASYYGN
60 70 80 90 100
PDILKFRHLK TLYPDIEFVD LEEQYRLSMV EAKKRRGKGA PKKMKKDAAA
110
TAKGKGKKKK
Length:110
Mass (Da):12,393
Last modified:October 1, 1996 - v1
Checksum:i05008CA4F5D09004
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73000 Genomic DNA. Translation: CAA97242.1.
AY558379 Genomic DNA. Translation: AAS56705.1.
BK006941 Genomic DNA. Translation: DAA08309.1.
PIRiS64538.
RefSeqiNP_011731.3. NM_001181344.3.

Genome annotation databases

EnsemblFungiiYGR215W; YGR215W; YGR215W.
GeneIDi853129.
KEGGisce:YGR215W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73000 Genomic DNA. Translation: CAA97242.1.
AY558379 Genomic DNA. Translation: AAS56705.1.
BK006941 Genomic DNA. Translation: DAA08309.1.
PIRiS64538.
RefSeqiNP_011731.3. NM_001181344.3.

3D structure databases

ProteinModelPortaliP53305.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi33468. 34 interactions.
DIPiDIP-5606N.
IntActiP53305. 3 interactions.
MINTiMINT-503149.
STRINGi4932.YGR215W.

Proteomic databases

MaxQBiP53305.
PaxDbiP53305.
PeptideAtlasiP53305.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYGR215W; YGR215W; YGR215W.
GeneIDi853129.
KEGGisce:YGR215W.

Organism-specific databases

CYGDiYGR215w.
SGDiS000003447. RSM27.

Phylogenomic databases

eggNOGiNOG294549.
HOGENOMiHOG000159261.
InParanoidiP53305.
OMAiTAYNPTS.
OrthoDBiEOG7Q8D20.

Enzyme and pathway databases

BioCyciYEAST:G3O-30897-MONOMER.

Miscellaneous databases

NextBioi973181.

Gene expression databases

GenevestigatoriP53305.

Family and domain databases

InterProiIPR013219. Ribosomal_S27/S33_mit.
[Graphical view]
PfamiPF08293. MRP-S33. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of 203 kilobases from Saccharomyces cerevisiae chromosome VII."
    Rieger M., Brueckner M., Schaefer M., Mueller-Auer S.
    Yeast 13:1077-1090(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
    Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E.
    , Defoor E., Del Bino S., Delius H., Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P., Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M., Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A., Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K., Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P., Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E., Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K., Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A., Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S., Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M., Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C., Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M., Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M., Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y., Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L., Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D., Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F., Zaccaria P., Zimmermann M., Zollner A., Kleine K.
    Nature 387:81-84(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  5. "Identification of 12 new yeast mitochondrial ribosomal proteins including 6 that have no prokaryotic homologues."
    Saveanu C., Fromont-Racine M., Harington A., Ricard F., Namane A., Jacquier A.
    J. Biol. Chem. 276:15861-15867(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION, IDENTIFICATION IN THE MITOCHONDRIAL RIBOSOMAL SMALL COMPLEX, IDENTIFICATION BY MASS SPECTROMETRY.
  6. "Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components."
    Gan X., Kitakawa M., Yoshino K., Oshiro N., Yonezawa K., Isono K.
    Eur. J. Biochem. 269:5203-5214(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION IN THE MITOCHONDRIAL RIBOSOMAL SMALL COMPLEX, IDENTIFICATION BY MASS SPECTROMETRY.
  7. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  8. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    Strain: ATCC 76625 / YPH499.
  9. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiRT27_YEAST
AccessioniPrimary (citable) accession number: P53305
Secondary accession number(s): D6VUZ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: March 4, 2015
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome VII
    Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.