P53301 (CRH1_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 93.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Probable glycosidase CRH1 EC=3.2.-.- Alternative name(s): Congo red hypersensitive protein 1 | ||||||
| Gene names |
| ||||||
| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 507 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Probable glycosidase that plays a role in cell wall architecture. Required for the transfer of chitin to 1,6-beta-glucan in the cell wall. Ref.6 Ref.10 |
| Subcellular location | Secreted › cell wall. Membrane; Lipid-anchor › GPI-anchor. Note: Covalently-linked GPI-modified cell wall protein (GPI-CWP), localized particularly in chitin-rich areas. Found at the incipient bud site, around the septum area in later stages of budding, and in ascospore envelopes. Redistributes uniformly over the cell cortex upon heat stress. Ref.4 Ref.6 Ref.7 Ref.8 Ref.10 |
| Induction | Positively regulated by cell integrity signaling through MPK1 in response to cell wall perturbation. Induced by heat stress. Ref.5 Ref.7 Ref.10 |
| Post-translational modification | The GPI-anchor is attached to the protein in the endoplasmic reticulum and serves to target the protein to the cell surface. There, the glucosamine-inositol phospholipid moiety is cleaved off and the GPI-modified mannoprotein is covalently attached via its lipidless GPI glycan remnant to the 1,6-beta-glucan of the outer cell wall layer. |
| Miscellaneous | Present with 44000 wall-bound molecules/cell in log phase YPD medium. Ref.9 |
| Sequence similarities | Belongs to the glycosyl hydrolase 16 family. CRH1 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell wall biogenesis/degradation |
| Cellular component | Cell wall Membrane Secreted |
| Domain | Signal |
| Molecular function | Glycosidase Hydrolase |
| PTM | GPI-anchor Glycoprotein Lipoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cell wall chitin metabolic process Inferred from mutant phenotype. Source: SGD fungal-type cell wall organizationInferred from mutant phenotype. Source: SGD |
| Cellular component | anchored to membrane Inferred from electronic annotation. Source: UniProtKB-KW extracellular regionInferred from electronic annotation. Source: UniProtKB-KW fungal-type cell wallInferred from direct assay Ref.6Ref.8. Source: SGD incipient cellular bud siteInferred from direct assay Ref.6. Source: SGD |
| Molecular function | hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro transferase activity, transferring glycosyl groupsInferred from mutant phenotype. Source: SGD |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| GET3 | Q12154 | 1 | EBI-23440,EBI-2989 | |
| PEX29 | Q03370 | 1 | EBI-23440,EBI-36170 | |
| YHR080C | P38800 | 1 | EBI-23440,EBI-24597 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 22 | 22 | Potential | ||||||
| Chain | 23 – 482 | 460 | Probable glycosidase CRH1 | PRO_0000045430 | |||||
| Propeptide | 483 – 507 | 25 | Removed in mature form Potential | PRO_0000045431 | |||||
Regions | |||||||||
| Compositional bias | 63 – 66 | 4 | Poly-Ser | ||||||
| Compositional bias | 301 – 481 | 181 | Ser-rich | ||||||
| Compositional bias | 301 – 310 | 10 | Poly-Ser | ||||||
| Compositional bias | 345 – 357 | 13 | Poly-Ser | ||||||
| Compositional bias | 387 – 391 | 5 | Poly-Ser | ||||||
| Compositional bias | 467 – 470 | 4 | Poly-Ser | ||||||
Sites | |||||||||
| Active site | 134 | 1 | Nucleophile By similarity | ||||||
| Active site | 138 | 1 | Proton donor By similarity | ||||||
Amino acid modifications | |||||||||
| Lipidation | 482 | 1 | GPI-anchor amidated asparagine Potential | ||||||
| Glycosylation | 117 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 177 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 201 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "DNA sequence analysis of a 23,002 bp DNA fragment of the right arm of Saccharomyces cerevisiae chromosome VII." Arroyo J., Garcia-Gonzalez M., Garcia-Saez M.I., Sanchez-Perez M., Nombela C. Yeast 13:357-363(1997) [PubMed: 9133739] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [2] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII." Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E. Kleine K.Nature 387:81-84(1997) [PubMed: 9169869] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [3] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [4] | "Screening for glycosylphosphatidylinositol (GPI)-dependent cell wall proteins in Saccharomyces cerevisiae." Hamada K., Fukuchi S., Arisawa M., Baba M., Kitada K. Mol. Gen. Genet. 258:53-59(1998) [PubMed: 9613572] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [5] | "Genome-wide analysis of gene expression regulated by the yeast cell wall integrity signalling pathway." Jung U.S., Levin D.E. Mol. Microbiol. 34:1049-1057(1999) [PubMed: 10594829] [Abstract] Cited for: INDUCTION. |
| [6] | "A novel family of cell wall-related proteins regulated differently during the yeast life cycle." Rodriguez-Pena J.M., Cid V.J., Arroyo J., Nombela C. Mol. Cell. Biol. 20:3245-3255(2000) [PubMed: 10757808] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION. |
| [7] | "Up-regulation of genes encoding glycosylphosphatidylinositol (GPI)-attached proteins in response to cell wall damage caused by disruption of FKS1 in Saccharomyces cerevisiae." Terashima H., Yabuki N., Arisawa M., Hamada K., Kitada K. Mol. Gen. Genet. 264:64-74(2000) [PubMed: 11016834] [Abstract] Cited for: INDUCTION, SUBCELLULAR LOCATION. |
| [8] | "Comprehensive proteomic analysis of Saccharomyces cerevisiae cell walls: identification of proteins covalently attached via glycosylphosphatidylinositol remnants or mild alkali-sensitive linkages." Yin Q.Y., de Groot P.W.J., Dekker H.L., de Jong L., Klis F.M., de Koster C.G. J. Biol. Chem. 280:20894-20901(2005) [PubMed: 15781460] [Abstract] Cited for: SUBCELLULAR LOCATION, IDENTIFICATION BY MASS SPECTROMETRY, PROBABLE GPI-ANCHOR. |
| [9] | "Mass spectrometric quantitation of covalently bound cell wall proteins in Saccharomyces cerevisiae." Yin Q.Y., de Groot P.W.J., de Jong L., Klis F.M., de Koster C.G. FEMS Yeast Res. 7:887-896(2007) [PubMed: 17617218] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION, MASS SPECTROMETRY. |
| [10] | "Crh1p and Crh2p are required for the cross-linking of chitin to beta(1-6)glucan in the Saccharomyces cerevisiae cell wall." Cabib E., Blanco N., Grau C., Rodriguez-Pena J.M., Arroyo J. Mol. Microbiol. 63:921-935(2007) [PubMed: 17302808] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INDUCTION BY HEAT STRESS. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z72974 Genomic DNA. Translation: CAA97215.1. X99074 Genomic DNA. Translation: CAA67525.1. BK006941 Genomic DNA. Translation: DAA08283.1. |
| PIR | S64507. |
| RefSeq | NP_011705.1. NM_001181318.1. |
3D structure databases | |
| ProteinModelPortal | P53301. |
| SMR | P53301. Positions 48-258. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-4360N. |
| IntAct | P53301. 3 interactions. |
| MINT | MINT-475521. |
| STRING | P53301. |
Protein family/group databases | |
| CAZy | GH16. Glycoside Hydrolase Family 16. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YGR189C; YGR189C; YGR189C. |
| GeneID | 853102. |
| KEGG | sce:YGR189C. |
| NMPDR | fig|4932.3.peg.2832. |
Organism-specific databases | |
| CYGD | YGR189c. |
| SGD | S000003421. CRH1. |
Phylogenomic databases | |
| eggNOG | fuNOG04197. |
| GeneTree | EFGT00050000000137. |
| OMA | AGTIEWA. |
| OrthoDB | EOG4VT962. |
Gene expression databases | |
| ArrayExpress | P53301. |
| Genevestigator | P53301. |
| GermOnline | YGR189C. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000757. Glyco_hydro_16. IPR017168. Glyco_hydro_16_CRH1_prd. [Graphical view] |
| Gene3D | G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. |
| Pfam | PF00722. Glyco_hydro_16. 1 hit. [Graphical view] |
| PIRSF | PIRSF037299. Glycosidase_CRH1_prd. 1 hit. |
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. |
| PROSITE | PS01034. GLYCOSYL_HYDROL_F16. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 973104. |
Entry information
| Entry name | CRH1_YEAST | ||||||||
| Accession | Primary (citable) accession number: P53301 Secondary accession number(s): D6VUX2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome VII Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names |
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with