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Protein

Uncharacterized protein YGR117C

Gene

YGR117C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-30824-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YGR117C
Gene namesi
Ordered Locus Names:YGR117C
ORF Names:G6172
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome VII

Organism-specific databases

CYGDiYGR117c.
EuPathDBiFungiDB:YGR117C.
SGDiS000003349. YGR117C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 476476Uncharacterized protein YGR117CPRO_0000202817Add
BLAST

Proteomic databases

MaxQBiP53270.
PaxDbiP53270.

Expressioni

Gene expression databases

GenevestigatoriP53270.

Interactioni

Protein-protein interaction databases

BioGridi33362. 5 interactions.
DIPiDIP-1623N.
IntActiP53270. 2 interactions.
MINTiMINT-410210.
STRINGi4932.YGR117C.

Structurei

3D structure databases

ProteinModelPortaliP53270.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 3933LisHPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 LisH domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG46922.
InParanoidiP53270.
OMAiDSYSQPI.
OrthoDBiEOG71CG02.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR006594. LisH.
IPR016520. UCP007778.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08513. LisH. 1 hit.
[Graphical view]
PIRSFiPIRSF007778. UCP007778. 1 hit.
SMARTiSM00667. LisH. 1 hit.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS50896. LISH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P53270-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADNSTSRFY TNLLIANYLK HNGLEDTLAA FIRETALPLS ALEKSDSSNS
60 70 80 90 100
NVGEIPLEDL QSVVEDRIYY KRRSFKDRFK TLSINDDLAP IDNAKYGIQP
110 120 130 140 150
WNHSLKFSID VKLNKSLPKD TLFISATFTE DSKYILLSSA TGYLVIYDIE
160 170 180 190 200
KATSKSFKIN EKVKSIVKLY GPIGSSGYQY VCPMNGSFYL LNNDFELVNN
210 220 230 240 250
AVWKIHARMI THIKICNVTE SSWFVITSGM DNFLRLSLLE IKNGNTFLTK
260 270 280 290 300
LSEIKLASNC TSLNVIANGD GNGQNSFSVF LTRAEYTHIA CYSIIDAKNL
310 320 330 340 350
VHSYNIALNN AEFSTYAFNI RDVMAVDYVH SNTKDTIGLS PSTMLVVATS
360 370 380 390 400
HKPYMRLILV EIPMNTGHPK AMKLDKVQTY YDKILRNFAT EIYQDDFSLP
410 420 430 440 450
ILGKLESSNG VLVGNDEGIY SVDLMTGDSR ILNIPGEANS LHDRIKCMDI
460 470
SKDQMRMVAG TSTKSIYILN VIRNAQ
Length:476
Mass (Da):53,438
Last modified:October 1, 1996 - v1
Checksum:i8829E3CF2C273FD4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z72902 Genomic DNA. Translation: CAA97125.1.
BK006941 Genomic DNA. Translation: DAA08209.1.
PIRiS64425.
RefSeqiNP_011632.3. NM_001181246.3.

Genome annotation databases

EnsemblFungiiYGR117C; YGR117C; YGR117C.
GeneIDi853014.
KEGGisce:YGR117C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z72902 Genomic DNA. Translation: CAA97125.1.
BK006941 Genomic DNA. Translation: DAA08209.1.
PIRiS64425.
RefSeqiNP_011632.3. NM_001181246.3.

3D structure databases

ProteinModelPortaliP53270.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi33362. 5 interactions.
DIPiDIP-1623N.
IntActiP53270. 2 interactions.
MINTiMINT-410210.
STRINGi4932.YGR117C.

Proteomic databases

MaxQBiP53270.
PaxDbiP53270.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYGR117C; YGR117C; YGR117C.
GeneIDi853014.
KEGGisce:YGR117C.

Organism-specific databases

CYGDiYGR117c.
EuPathDBiFungiDB:YGR117C.
SGDiS000003349. YGR117C.

Phylogenomic databases

eggNOGiNOG46922.
InParanoidiP53270.
OMAiDSYSQPI.
OrthoDBiEOG71CG02.

Enzyme and pathway databases

BioCyciYEAST:G3O-30824-MONOMER.

Miscellaneous databases

NextBioi972875.
PROiP53270.

Gene expression databases

GenevestigatoriP53270.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR006594. LisH.
IPR016520. UCP007778.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08513. LisH. 1 hit.
[Graphical view]
PIRSFiPIRSF007778. UCP007778. 1 hit.
SMARTiSM00667. LisH. 1 hit.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS50896. LISH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of a 23.4 kb segment on the right arm of chromosome VII from Saccharomyces cerevisiae reveals CLB6, SPT6, RP28A and NUP57 genes, a Ty3 element and 11 new open reading frames."
    Hansen M., Albers M., Backes U., Coblenz A., Leuther H., Neu R., Schreer A., Schaefer B., Zimmermann M., Wolf K.
    Yeast 12:1273-1277(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
    Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E.
    , Defoor E., Del Bino S., Delius H., Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P., Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M., Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A., Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K., Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P., Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E., Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K., Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A., Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S., Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M., Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C., Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M., Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M., Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y., Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L., Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D., Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F., Zaccaria P., Zimmermann M., Zollner A., Kleine K.
    Nature 387:81-84(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYG32_YEAST
AccessioniPrimary (citable) accession number: P53270
Secondary accession number(s): D6VUP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 29, 2015
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1280 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome VII
    Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.