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P53270

- YG32_YEAST

UniProt

P53270 - YG32_YEAST

Protein

Uncharacterized protein YGR117C

Gene

YGR117C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 88 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-30824-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YGR117C
    Gene namesi
    Ordered Locus Names:YGR117C
    ORF Names:G6172
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome VII

    Organism-specific databases

    CYGDiYGR117c.
    SGDiS000003349. YGR117C.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 476476Uncharacterized protein YGR117CPRO_0000202817Add
    BLAST

    Proteomic databases

    MaxQBiP53270.
    PaxDbiP53270.

    Expressioni

    Gene expression databases

    GenevestigatoriP53270.

    Interactioni

    Protein-protein interaction databases

    BioGridi33362. 4 interactions.
    DIPiDIP-1623N.
    IntActiP53270. 2 interactions.
    MINTiMINT-410210.
    STRINGi4932.YGR117C.

    Structurei

    3D structure databases

    ProteinModelPortaliP53270.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini7 – 3933LisHPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 LisH domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG46922.
    OMAiARMITHI.
    OrthoDBiEOG71CG02.

    Family and domain databases

    Gene3Di2.130.10.10. 3 hits.
    InterProiIPR006594. LisH_dimerisation.
    IPR013720. LisH_dimerisation_subgr.
    IPR016520. UCP007778.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR017986. WD40_repeat_dom.
    [Graphical view]
    PfamiPF08513. LisH. 1 hit.
    [Graphical view]
    PIRSFiPIRSF007778. UCP007778. 1 hit.
    SMARTiSM00667. LisH. 1 hit.
    [Graphical view]
    SUPFAMiSSF50978. SSF50978. 2 hits.
    PROSITEiPS50896. LISH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P53270-1 [UniParc]FASTAAdd to Basket

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    MADNSTSRFY TNLLIANYLK HNGLEDTLAA FIRETALPLS ALEKSDSSNS    50
    NVGEIPLEDL QSVVEDRIYY KRRSFKDRFK TLSINDDLAP IDNAKYGIQP 100
    WNHSLKFSID VKLNKSLPKD TLFISATFTE DSKYILLSSA TGYLVIYDIE 150
    KATSKSFKIN EKVKSIVKLY GPIGSSGYQY VCPMNGSFYL LNNDFELVNN 200
    AVWKIHARMI THIKICNVTE SSWFVITSGM DNFLRLSLLE IKNGNTFLTK 250
    LSEIKLASNC TSLNVIANGD GNGQNSFSVF LTRAEYTHIA CYSIIDAKNL 300
    VHSYNIALNN AEFSTYAFNI RDVMAVDYVH SNTKDTIGLS PSTMLVVATS 350
    HKPYMRLILV EIPMNTGHPK AMKLDKVQTY YDKILRNFAT EIYQDDFSLP 400
    ILGKLESSNG VLVGNDEGIY SVDLMTGDSR ILNIPGEANS LHDRIKCMDI 450
    SKDQMRMVAG TSTKSIYILN VIRNAQ 476
    Length:476
    Mass (Da):53,438
    Last modified:October 1, 1996 - v1
    Checksum:i8829E3CF2C273FD4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z72902 Genomic DNA. Translation: CAA97125.1.
    BK006941 Genomic DNA. Translation: DAA08209.1.
    PIRiS64425.
    RefSeqiNP_011632.3. NM_001181246.3.

    Genome annotation databases

    EnsemblFungiiYGR117C; YGR117C; YGR117C.
    GeneIDi853014.
    KEGGisce:YGR117C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z72902 Genomic DNA. Translation: CAA97125.1 .
    BK006941 Genomic DNA. Translation: DAA08209.1 .
    PIRi S64425.
    RefSeqi NP_011632.3. NM_001181246.3.

    3D structure databases

    ProteinModelPortali P53270.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 33362. 4 interactions.
    DIPi DIP-1623N.
    IntActi P53270. 2 interactions.
    MINTi MINT-410210.
    STRINGi 4932.YGR117C.

    Proteomic databases

    MaxQBi P53270.
    PaxDbi P53270.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YGR117C ; YGR117C ; YGR117C .
    GeneIDi 853014.
    KEGGi sce:YGR117C.

    Organism-specific databases

    CYGDi YGR117c.
    SGDi S000003349. YGR117C.

    Phylogenomic databases

    eggNOGi NOG46922.
    OMAi ARMITHI.
    OrthoDBi EOG71CG02.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-30824-MONOMER.

    Miscellaneous databases

    NextBioi 972875.

    Gene expression databases

    Genevestigatori P53270.

    Family and domain databases

    Gene3Di 2.130.10.10. 3 hits.
    InterProi IPR006594. LisH_dimerisation.
    IPR013720. LisH_dimerisation_subgr.
    IPR016520. UCP007778.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR017986. WD40_repeat_dom.
    [Graphical view ]
    Pfami PF08513. LisH. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF007778. UCP007778. 1 hit.
    SMARTi SM00667. LisH. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50978. SSF50978. 2 hits.
    PROSITEi PS50896. LISH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The sequence of a 23.4 kb segment on the right arm of chromosome VII from Saccharomyces cerevisiae reveals CLB6, SPT6, RP28A and NUP57 genes, a Ty3 element and 11 new open reading frames."
      Hansen M., Albers M., Backes U., Coblenz A., Leuther H., Neu R., Schreer A., Schaefer B., Zimmermann M., Wolf K.
      Yeast 12:1273-1277(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
      Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E.
      , Defoor E., Del Bino S., Delius H., Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P., Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M., Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A., Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K., Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P., Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E., Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K., Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A., Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S., Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M., Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C., Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M., Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M., Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y., Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L., Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D., Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F., Zaccaria P., Zimmermann M., Zollner A., Kleine K.
      Nature 387:81-84(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiYG32_YEAST
    AccessioniPrimary (citable) accession number: P53270
    Secondary accession number(s): D6VUP8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 88 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 1280 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    3. Yeast chromosome VII
      Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

    External Data

    Dasty 3