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P53270

- YG32_YEAST

UniProt

P53270 - YG32_YEAST

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Protein

Uncharacterized protein YGR117C

Gene

YGR117C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-30824-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YGR117C
Gene namesi
Ordered Locus Names:YGR117C
ORF Names:G6172
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome VII

Organism-specific databases

CYGDiYGR117c.
SGDiS000003349. YGR117C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 476476Uncharacterized protein YGR117CPRO_0000202817Add
BLAST

Proteomic databases

MaxQBiP53270.
PaxDbiP53270.

Expressioni

Gene expression databases

GenevestigatoriP53270.

Interactioni

Protein-protein interaction databases

BioGridi33362. 5 interactions.
DIPiDIP-1623N.
IntActiP53270. 2 interactions.
MINTiMINT-410210.
STRINGi4932.YGR117C.

Structurei

3D structure databases

ProteinModelPortaliP53270.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 3933LisHPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 LisH domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG46922.
InParanoidiP53270.
OMAiARMITHI.
OrthoDBiEOG71CG02.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR006594. LisH_dimerisation.
IPR013720. LisH_dimerisation_subgr.
IPR016520. UCP007778.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08513. LisH. 1 hit.
[Graphical view]
PIRSFiPIRSF007778. UCP007778. 1 hit.
SMARTiSM00667. LisH. 1 hit.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS50896. LISH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P53270-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADNSTSRFY TNLLIANYLK HNGLEDTLAA FIRETALPLS ALEKSDSSNS
60 70 80 90 100
NVGEIPLEDL QSVVEDRIYY KRRSFKDRFK TLSINDDLAP IDNAKYGIQP
110 120 130 140 150
WNHSLKFSID VKLNKSLPKD TLFISATFTE DSKYILLSSA TGYLVIYDIE
160 170 180 190 200
KATSKSFKIN EKVKSIVKLY GPIGSSGYQY VCPMNGSFYL LNNDFELVNN
210 220 230 240 250
AVWKIHARMI THIKICNVTE SSWFVITSGM DNFLRLSLLE IKNGNTFLTK
260 270 280 290 300
LSEIKLASNC TSLNVIANGD GNGQNSFSVF LTRAEYTHIA CYSIIDAKNL
310 320 330 340 350
VHSYNIALNN AEFSTYAFNI RDVMAVDYVH SNTKDTIGLS PSTMLVVATS
360 370 380 390 400
HKPYMRLILV EIPMNTGHPK AMKLDKVQTY YDKILRNFAT EIYQDDFSLP
410 420 430 440 450
ILGKLESSNG VLVGNDEGIY SVDLMTGDSR ILNIPGEANS LHDRIKCMDI
460 470
SKDQMRMVAG TSTKSIYILN VIRNAQ
Length:476
Mass (Da):53,438
Last modified:October 1, 1996 - v1
Checksum:i8829E3CF2C273FD4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z72902 Genomic DNA. Translation: CAA97125.1.
BK006941 Genomic DNA. Translation: DAA08209.1.
PIRiS64425.
RefSeqiNP_011632.3. NM_001181246.3.

Genome annotation databases

EnsemblFungiiYGR117C; YGR117C; YGR117C.
GeneIDi853014.
KEGGisce:YGR117C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z72902 Genomic DNA. Translation: CAA97125.1 .
BK006941 Genomic DNA. Translation: DAA08209.1 .
PIRi S64425.
RefSeqi NP_011632.3. NM_001181246.3.

3D structure databases

ProteinModelPortali P53270.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 33362. 5 interactions.
DIPi DIP-1623N.
IntActi P53270. 2 interactions.
MINTi MINT-410210.
STRINGi 4932.YGR117C.

Proteomic databases

MaxQBi P53270.
PaxDbi P53270.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YGR117C ; YGR117C ; YGR117C .
GeneIDi 853014.
KEGGi sce:YGR117C.

Organism-specific databases

CYGDi YGR117c.
SGDi S000003349. YGR117C.

Phylogenomic databases

eggNOGi NOG46922.
InParanoidi P53270.
OMAi ARMITHI.
OrthoDBi EOG71CG02.

Enzyme and pathway databases

BioCyci YEAST:G3O-30824-MONOMER.

Miscellaneous databases

NextBioi 972875.

Gene expression databases

Genevestigatori P53270.

Family and domain databases

Gene3Di 2.130.10.10. 3 hits.
InterProi IPR006594. LisH_dimerisation.
IPR013720. LisH_dimerisation_subgr.
IPR016520. UCP007778.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF08513. LisH. 1 hit.
[Graphical view ]
PIRSFi PIRSF007778. UCP007778. 1 hit.
SMARTi SM00667. LisH. 1 hit.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 2 hits.
PROSITEi PS50896. LISH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of a 23.4 kb segment on the right arm of chromosome VII from Saccharomyces cerevisiae reveals CLB6, SPT6, RP28A and NUP57 genes, a Ty3 element and 11 new open reading frames."
    Hansen M., Albers M., Backes U., Coblenz A., Leuther H., Neu R., Schreer A., Schaefer B., Zimmermann M., Wolf K.
    Yeast 12:1273-1277(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
    Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E.
    , Defoor E., Del Bino S., Delius H., Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P., Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M., Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A., Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K., Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P., Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E., Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K., Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A., Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S., Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M., Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C., Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M., Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M., Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y., Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L., Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D., Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F., Zaccaria P., Zimmermann M., Zollner A., Kleine K.
    Nature 387:81-84(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYG32_YEAST
AccessioniPrimary (citable) accession number: P53270
Secondary accession number(s): D6VUP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 29, 2014
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1280 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome VII
    Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

External Data

Dasty 3