P53072 (TAN1_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 82.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: tRNA acetyltransferase TAN1 EC=2.3.-.- | ||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||
| Taxonomic identifier | 559292 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 289 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Probable tRNA acetyltransferase required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs. Binds RNA. Ref.3 |
| Subcellular location | |
| Miscellaneous | Present with 2630 molecules/cell in log phase SD medium. Ref.5 |
| Sequence similarities | Contains 1 THUMP domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | tRNA processing |
| Cellular component | Cytoplasm Nucleus |
| Ligand | RNA-binding |
| Molecular function | Acyltransferase Transferase |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | tRNA modification Inferred from mutant phenotype Ref.3. Source: SGD |
| Cellular component | cytoplasm Inferred from direct assay Ref.4. Source: SGD nucleusInferred from direct assay Ref.4. Source: SGD |
| Molecular function | RNA binding Inferred from direct assay Ref.3. Source: SGD transferase activity, transferring acyl groupsInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII." Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E. Kleine K.Nature 387:81-84(1997) [PubMed: 9169869] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [2] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [3] | "The Saccharomyces cerevisiae TAN1 gene is required for N4-acetylcytidine formation in tRNA." Johansson M.J., Bystroem A.S. RNA 10:712-719(2004) [PubMed: 15037780] [Abstract] Cited for: FUNCTION. |
| [4] | "Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed: 14562095] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. |
| [5] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [6] | "Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae." Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P. J. Proteome Res. 6:1190-1197(2007) [PubMed: 17330950] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY. Strain: ADR376. |
| [7] | "Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases." Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H. Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed: 17563356] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY. |
| [8] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z72754 Genomic DNA. Translation: CAA96950.1. BK006941 Genomic DNA. Translation: DAA07886.1. |
| PIR | S64254. |
| RefSeq | NP_011282.1. NM_001181098.1. |
3D structure databases | |
| ProteinModelPortal | P53072. |
| SMR | P53072. Positions 165-261. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P53072. 1 interaction. |
| MINT | MINT-2492386. |
| STRING | P53072. |
Proteomic databases | |
| PeptideAtlas | P53072. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YGL232W; YGL232W; YGL232W. |
| GeneID | 852619. |
| KEGG | sce:YGL232W. |
| NMPDR | fig|4932.3.peg.2385. |
Organism-specific databases | |
| CYGD | YGL232w. |
| SGD | S000003201. TAN1. |
Phylogenomic databases | |
| eggNOG | fuNOG09021. |
| GeneTree | EFGT00050000004115. |
| HOGENOM | HBG397782. |
| OMA | SGIYATC. |
| OrthoDB | EOG4BZRBX. |
Gene expression databases | |
| ArrayExpress | P53072. |
| Genevestigator | P53072. |
| GermOnline | YGL232W. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR004114. THUMP. [Graphical view] |
| KO | K06963. |
| Pfam | PF02926. THUMP. 1 hit. [Graphical view] |
| SMART | SM00981. THUMP. 1 hit. [Graphical view] |
| PROSITE | PS51165. THUMP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 971829. |
Entry information
| Entry name | TAN1_YEAST | ||||||||
| Accession | Primary (citable) accession number: P53072 Secondary accession number(s): D6VVA2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome VII Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with