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P53072 (TAN1_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
tRNA acetyltransferase TAN1

EC=2.3.-.-
Gene names
Name:TAN1
Ordered Locus Names:YGL232W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Probable tRNA acetyltransferase required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs. Binds RNA. Ref.3

Subcellular location

Cytoplasm. Nucleus Ref.4.

Miscellaneous

Present with 2630 molecules/cell in log phase SD medium. Ref.5

Sequence similarities

Contains 1 THUMP domain.

Ontologies

Keywords
   Biological processtRNA processing
   Cellular componentCytoplasm
Nucleus
   LigandRNA-binding
   Molecular functionAcyltransferase
Transferase
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processtRNA modification

Inferred from mutant phenotype Ref.3. Source: SGD

   Cellular componentcytoplasm

Inferred from direct assay Ref.4. Source: SGD

nucleus

Inferred from direct assay Ref.4. Source: SGD

   Molecular functionRNA binding

Inferred from direct assay Ref.3. Source: SGD

transferase activity, transferring acyl groups

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 289289tRNA acetyltransferase TAN1
PRO_0000072426

Regions

Domain146 – 259114THUMP

Amino acid modifications

Modified residue721Phosphoserine Ref.6 Ref.7 Ref.8

Sequences

Sequence LengthMass (Da)Tools
P53072 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 0E1C8C55E70CEB28

FASTA28933,550
        10         20         30         40         50         60 
MGEKRNRNGK DANSQNRKKF KVSSGFLDPG TSGIYATCSR RHERQAAQEL QLLFEEKFQE 

        70         80         90        100        110        120 
LYGDIKEGED ESENDEKKDL SIEDQIKKEL QELKGEETGK DLSSGETKKK DPLAFIDLNC 

       130        140        150        160        170        180 
ECVTFCKTRK PIVPEEFVLS IMKDLADPKN MVKRTRYVQK LTPITYSCNA KMEQLIKLAN 

       190        200        210        220        230        240 
LVIGPHFHDP SNVKKNYKFA VEVTRRNFNT IERMDIINQV VKLVNKEGSE FNHTVDLKNY 

       250        260        270        280 
DKLILVECFK SNIGMCVVDG DYKTKYRKYN VQQLYESKFR KDEDKSVKQ 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E. expand/collapse author list , Defoor E., Del Bino S., Delius H., Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P., Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M., Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A., Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K., Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P., Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E., Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K., Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A., Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S., Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M., Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C., Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M., Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M., Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y., Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L., Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D., Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F., Zaccaria P., Zimmermann M., Zollner A., Kleine K.
Nature 387:81-84(1997) [PubMed: 9169869] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 96604 / S288c / FY1679.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"The Saccharomyces cerevisiae TAN1 gene is required for N4-acetylcytidine formation in tRNA."
Johansson M.J., Bystroem A.S.
RNA 10:712-719(2004) [PubMed: 15037780] [Abstract]
Cited for: FUNCTION.
[4]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed: 14562095] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[5]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[6]"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae."
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.
J. Proteome Res. 6:1190-1197(2007) [PubMed: 17330950] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY.
Strain: ADR376.
[7]"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases."
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed: 17563356] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY.
[8]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-72, MASS SPECTROMETRY.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z72754 Genomic DNA. Translation: CAA96950.1.
BK006941 Genomic DNA. Translation: DAA07886.1.
PIRS64254.
RefSeqNP_011282.1. NM_001181098.1.

3D structure databases

ProteinModelPortalP53072.
SMRP53072. Positions 165-261.
ModBaseSearch...

Protein-protein interaction databases

IntActP53072. 1 interaction.
MINTMINT-2492386.
STRINGP53072.

Proteomic databases

PeptideAtlasP53072.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYGL232W; YGL232W; YGL232W.
GeneID852619.
KEGGsce:YGL232W.
NMPDRfig|4932.3.peg.2385.

Organism-specific databases

CYGDYGL232w.
SGDS000003201. TAN1.

Phylogenomic databases

eggNOGfuNOG09021.
GeneTreeEFGT00050000004115.
HOGENOMHBG397782.
OMASGIYATC.
OrthoDBEOG4BZRBX.

Gene expression databases

ArrayExpressP53072.
GenevestigatorP53072.
GermOnlineYGL232W. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR004114. THUMP.
[Graphical view]
KOK06963.
PfamPF02926. THUMP. 1 hit.
[Graphical view]
SMARTSM00981. THUMP. 1 hit.
[Graphical view]
PROSITEPS51165. THUMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio971829.

Entry information

Entry nameTAN1_YEAST
AccessionPrimary (citable) accession number: P53072
Secondary accession number(s): D6VVA2
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: December 14, 2011
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome VII

Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names

SIMILARITY comments

Index of protein domains and families