Reviewed,
UniProtKB/Swiss-Prot P53058 (VEL1_YEAST)
Last modified
November 24, 2009.
Version 50.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Protein VEL1 Alternative name(s): Velum formation protein 1 | ||||||
| Gene names |
| ||||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||||
| Taxonomic identifier | 4932 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 206 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | Cytoplasm › cytosol By similarity. Note: Intracellular soluble fraction By similarity. |
| Induction | In zinc-depleted conditions and has increased expression in NAP1 deletion mutants. Ref.3 Ref.5 |
| Post-translational modification | N-glycosylated. |
| Sequence similarities | Belongs to the VEL1 family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Domain | Signal |
| Ligand | Zinc |
| PTM | Glycoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytosol Inferred from electronic annotation. Source: UniProtKB-SubCell soluble fraction Ref.4Inferred from direct assay. Source: SGD |
| Molecular function | zinc ion binding Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 19 | 19 | Potential | ||||||
| Chain | 20 – 206 | 187 | Protein VEL1 | PRO_0000202704 | |||||
Amino acid modifications | |||||||||
| Glycosylation | 26 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 48 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 91 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 139 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 152 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Sequence of a 39,411 bp DNA fragment covering the left end of chromosome VII of Saccharomyces cerevisiae." Coissac E., Maillier E., Robineau S., Netter P. Yeast 12:1555-1562(1996) [PubMed: 8972578] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [2] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII." Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E. Kleine K.Nature 387:81-84(1997) [PubMed: 9169869] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [3] | "Genome-wide expression analysis of NAP1 in Saccharomyces cerevisiae." Ohkuni K., Shirahige K., Kikuchi A. Biochem. Biophys. Res. Commun. 306:5-9(2003) [PubMed: 12788058] [Abstract] Cited for: INDUCTION. |
| [4] | "Sequence-based approach for identification of cell wall proteins in Saccharomyces cerevisiae." Terashima H., Fukuchi S., Nakai K., Arisawa M., Hamada K., Yabuki N., Kitada K. Curr. Genet. 40:311-316(2002) [PubMed: 11935221] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [5] | "Application of genome-wide expression analysis to identify molecular markers useful in monitoring industrial fermentations." Higgins V.J., Rogers P.J., Dawes I.W. Appl. Environ. Microbiol. 69:7535-7540(2003) [PubMed: 14660410] [Abstract] Cited for: INDUCTION BY ZINC DEPLETION. |
| [6] | "Global analysis of the glycoproteome in Saccharomyces cerevisiae reveals new roles for protein glycosylation in eukaryotes." Kung L.A., Tao S.-C., Qian J., Smith M.G., Snyder M., Zhu H. Mol. Syst. Biol. 5:308-308(2009) [PubMed: 19756047] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| X94357 Genomic DNA. Translation: CAA64129.1. Z72780 Genomic DNA. Translation: CAA96978.1. | |
| PIR | S61603. |
| RefSeq | NP_011256.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:4876N. |
| IntAct | P53058. 2 interactions. |
| STRING | P53058. |
Genome annotation databases | |
| Ensembl | YGL258W; YGL258W; YGL258W; Saccharomyces cerevisiae. [Genome view] |
| GeneID | 852634. |
| KEGG | sce:YGL258W. |
| NMPDR | fig|4932.3.peg.2359. |
Organism-specific databases | |
| CYGD | YGL258w. |
| SGD | S000003227. VEL1. |
Phylogenomic databases | |
| HOGENOM | P53058. |
| OMA | TIASNET |
| OrthoDB | EOG9F4TVF |
Gene expression databases | |
| ArrayExpress | P53058. |
| Genevestigator | P53058. |
| GermOnline | YGL258W. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR019435. Velum_formation_protein. [Graphical view] |
| Pfam | PF10339. Vel1p. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 971873. |
Entry information
| Entry name | VEL1_YEAST | ||||||||
| Accession | Primary (citable) accession number: P53058 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome VII Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names |

Clusters with


