P52735 (VAV2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 138.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Guanine nucleotide exchange factor VAV2 Short name=VAV-2 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 878 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Guanine nucleotide exchange factor for the Rho family of Ras-related GTPases. Plays an important role in angiogenesis. Its recruitment by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly By similarity. |
| Subunit structure | Interacts (via SH2 domains) with the phosphorylated form of EPHA2 By similarity. Interacts with NEK3 and PRLR and this interaction is prolactin-dependent. Ref.9 |
| Tissue specificity | Widely expressed. |
| Post-translational modification | Phosphorylated on tyrosine residues in response to FGR activation. Ref.7 Ref.8 |
| Sequence similarities | Contains 1 CH (calponin-homology) domain. Contains 1 DH (DBL-homology) domain. Contains 1 PH domain. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 SH2 domain. Contains 2 SH3 domains. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| NEK3 | P51956 | 3 | EBI-297549,EBI-476041 | |
| TOM1L1 | O75674 | 2 | EBI-297549,EBI-712991 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P52735-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P52735-2) The sequence of this isoform differs from the canonical sequence as follows: 185-189: Missing. 470-474: Missing. | ||||||
| Isoform 3 (identifier: P52735-3) The sequence of this isoform differs from the canonical sequence as follows: 185-189: Missing. 470-474: Missing. 783-811: Missing. | ||||||
| Note: Contains a phosphoserine at position 769. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 878 | 878 | Guanine nucleotide exchange factor VAV2 | PRO_0000080984 | ||||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 1 – 119 | 119 | CH | |||||||||||||||||||||||||||||||||||||||||
| Domain | 198 – 376 | 179 | DH | |||||||||||||||||||||||||||||||||||||||||
| Domain | 405 – 512 | 108 | PH | |||||||||||||||||||||||||||||||||||||||||
| Domain | 586 – 652 | 67 | SH3 1 | |||||||||||||||||||||||||||||||||||||||||
| Domain | 673 – 767 | 95 | SH2 | |||||||||||||||||||||||||||||||||||||||||
| Domain | 816 – 877 | 62 | SH3 2 | |||||||||||||||||||||||||||||||||||||||||
| Zinc finger | 523 – 572 | 50 | Phorbol-ester/DAG-type | |||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 142 | 1 | Phosphotyrosine; by EGFR Ref.7 | |||||||||||||||||||||||||||||||||||||||||
| Modified residue | 159 | 1 | Phosphotyrosine; by EGFR Ref.7 | |||||||||||||||||||||||||||||||||||||||||
| Modified residue | 172 | 1 | Phosphotyrosine; by EGFR Ref.7 | |||||||||||||||||||||||||||||||||||||||||
| Modified residue | 576 | 1 | Phosphoserine Ref.13 | |||||||||||||||||||||||||||||||||||||||||
| Modified residue | 626 | 1 | Phosphoserine Ref.11 | |||||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 185 – 189 | 5 | Missing in isoform 2 and isoform 3. | VSP_034900 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 470 – 474 | 5 | Missing in isoform 2 and isoform 3. | VSP_034901 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 783 – 811 | 29 | Missing in isoform 3. | VSP_034902 | ||||||||||||||||||||||||||||||||||||||||
| Natural variant | 594 | 1 | M → V. Ref.1 Ref.4 Corresponds to variant rs602990 [ dbSNP | Ensembl ]. | VAR_045690 | ||||||||||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 241 | 1 | F → L in CAE45861. Ref.5 | |||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 254 | 1 | F → L in CAE45861. Ref.5 | |||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 877 | 1 | I → T in CAE45861. Ref.5 | |||||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 661 – 664 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 668 – 670 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 674 – 677 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 680 – 689 | 10 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 694 – 698 | 5 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 707 – 712 | 6 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 714 – 725 | 12 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 728 – 731 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 737 – 739 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 740 – 747 | 8 | ||||||||||||||||||||||||||||||||||||||||||
| Turn | 752 – 755 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 767 – 769 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 819 – 825 | 7 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 842 – 844 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 847 – 854 | 8 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 856 – 860 | 5 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 863 – 867 | 5 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 869 – 874 | 6 | ||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification of VAV2 on 9q34 and its exclusion as the tuberous sclerosis gene TSC1." Henske E.P., Short M.P., Jozwiak S., Bovey C.M., Ramlakhan S., Haines J.L., Kwiatkowski D.J. Ann. Hum. Genet. 59:25-37(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT VAL-594. Tissue: Brain. |
| [2] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANT VAL-594. Tissue: Kidney. |
| [5] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 39-878 (ISOFORM 3). Tissue: Rectum tumor. |
| [6] | "Transcript variant of VAV2 gene in tumoral cell lines (FaDu, HEp2, HeLa and SiHa)." Mancini U.M., Tajara E.H. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 453-506 (ISOFORMS 2/3). |
| [7] | "Mechanism of epidermal growth factor regulation of Vav2, a guanine nucleotide exchange factor for Rac." Tamas P., Solti Z., Bauer P., Illes A., Sipeki S., Bauer A., Farago A., Downward J., Buday L. J. Biol. Chem. 278:5163-5171(2003) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION AT TYR-142; TYR-159 AND TYR-172 BY EGFR. |
| [8] | "The proto-oncogene Fgr regulates cell migration and this requires its plasma membrane localization." Continolo S., Baruzzi A., Majeed M., Caveggion E., Fumagalli L., Lowell C.A., Berton G. Exp. Cell Res. 302:253-269(2005) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION. |
| [9] | "Novel association of Vav2 and Nek3 modulates signaling through the human prolactin receptor." Miller S.L., DeMaria J.E., Freier D.O., Riegel A.M., Clevenger C.V. Mol. Endocrinol. 19:939-949(2005) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH NEK3 AND PRLR. |
| [10] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [11] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-626, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [12] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-769 (ISOFORM 3), MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-576, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [14] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [15] | "Solution structure of the SH2 domain and of the second SH3 domain of human protein VAV-2." RIKEN structural genomics initiative (RSGI) Submitted (APR-2007) to the PDB data bank Cited for: STRUCTURE BY NMR OF 663-878. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | S76992 mRNA. Translation: AAB34377.1. AL590710, AL357934, AL445931 Genomic DNA. Translation: CAI12279.1. AL445931, AL357934, AL590710 Genomic DNA. Translation: CAI13722.1. AL357934, AL445931, AL590710 Genomic DNA. Translation: CAI15783.1. AL590710, AL357934, AL445931 Genomic DNA. Translation: CAI12278.1. AL445931, AL357934, AL590710 Genomic DNA. Translation: CAI13723.1. AL357934, AL445931, AL590710 Genomic DNA. Translation: CAI15781.1. AL590710, AL357934, AL445931 Genomic DNA. Translation: CAI12280.1. AL445931, AL357934, AL590710 Genomic DNA. Translation: CAI13724.1. AL357934, AL445931, AL590710 Genomic DNA. Translation: CAI15782.1. CH471090 Genomic DNA. Translation: EAW88108.1. BC033187 mRNA. Translation: AAH33187.1. BC132965 mRNA. Translation: AAI32966.1. BC132967 mRNA. Translation: AAI32968.1. BX640754 mRNA. Translation: CAE45861.1. AY563001 mRNA. Translation: AAS75591.1. | ||||||||||||||||||||||||||||||
| IPI | IPI00004977. IPI00472451. IPI00872160. | ||||||||||||||||||||||||||||||
| PIR | I51940. | ||||||||||||||||||||||||||||||
| RefSeq | NP_001127870.1. NM_001134398.1. NP_003362.2. NM_003371.3. | ||||||||||||||||||||||||||||||
| UniGene | Hs.369921. Hs.689325. | ||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||||||||
| ProteinModelPortal | P52735. | ||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||
| IntAct | P52735. 48 interactions. | ||||||||||||||||||||||||||||||
| MINT | MINT-1494337. | ||||||||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||||||||
| PhosphoSite | P52735. | ||||||||||||||||||||||||||||||
Polymorphism databases | |||||||||||||||||||||||||||||||
| DMDM | 212287930. | ||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||
| PaxDb | P52735. | ||||||||||||||||||||||||||||||
| PRIDE | P52735. | ||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||
| Ensembl | ENST00000371850; ENSP00000360916; ENSG00000160293. ENST00000371851; ENSP00000360917; ENSG00000160293. ENST00000406606; ENSP00000385362; ENSG00000160293. | ||||||||||||||||||||||||||||||
| GeneID | 7410. | ||||||||||||||||||||||||||||||
| KEGG | hsa:7410. | ||||||||||||||||||||||||||||||
| UCSC | uc004cer.3. human. uc004ces.3. human. | ||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||
| CTD | 7410. | ||||||||||||||||||||||||||||||
| GeneCards | GC09M136627. | ||||||||||||||||||||||||||||||
| HGNC | HGNC:12658. VAV2. | ||||||||||||||||||||||||||||||
| HPA | HPA003224. | ||||||||||||||||||||||||||||||
| MIM | 600428. gene. | ||||||||||||||||||||||||||||||
| neXtProt | NX_P52735. | ||||||||||||||||||||||||||||||
| PharmGKB | PA37281. | ||||||||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||
| eggNOG | NOG326494. | ||||||||||||||||||||||||||||||
| HOVERGEN | HBG018066. | ||||||||||||||||||||||||||||||
| InParanoid | P52735. | ||||||||||||||||||||||||||||||
| KO | K05730. | ||||||||||||||||||||||||||||||
| OMA | WFAGNME. | ||||||||||||||||||||||||||||||
| OrthoDB | EOG41NTKH. | ||||||||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||||||||
| Pathway_Interaction_DB | bcr_5pathway. BCR signaling pathway. epha_fwdpathway. EPHA forward signaling. epha2_fwdpathway. EPHA2 forward signaling. epopathway. EPO signaling pathway. pdgfrbpathway. PDGFR-beta signaling pathway. | ||||||||||||||||||||||||||||||
| Reactome | REACT_111045. Developmental Biology. REACT_111102. Signal Transduction. REACT_604. Hemostasis. REACT_6900. Immune System. | ||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||
| Bgee | P52735. | ||||||||||||||||||||||||||||||
| Genevestigator | P52735. | ||||||||||||||||||||||||||||||
| GermOnline | ENSG00000160293. Homo sapiens. | ||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||
| Gene3D | 1.10.418.10. 1 hit. 1.20.900.10. 1 hit. 2.30.29.30. 1 hit. 3.30.505.10. 1 hit. | ||||||||||||||||||||||||||||||
| InterPro | IPR001715. CH-domain. IPR000219. DH-domain. IPR001331. GDS_CDC24_CS. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. IPR002219. Prot_Kinase_C-like_PE/DAG-bd. IPR000980. SH2. IPR011511. SH3_2. IPR001452. SH3_domain. [Graphical view] | ||||||||||||||||||||||||||||||
| Pfam | PF00130. C1_1. 1 hit. PF00307. CH. 1 hit. PF00169. PH. 1 hit. PF00621. RhoGEF. 1 hit. PF00017. SH2. 1 hit. PF07653. SH3_2. 2 hits. [Graphical view] | ||||||||||||||||||||||||||||||
| PRINTS | PR00401. SH2DOMAIN. PR00452. SH3DOMAIN. | ||||||||||||||||||||||||||||||
| SMART | SM00109. C1. 1 hit. SM00033. CH. 1 hit. SM00233. PH. 1 hit. SM00325. RhoGEF. 1 hit. SM00252. SH2. 1 hit. SM00326. SH3. 2 hits. [Graphical view] | ||||||||||||||||||||||||||||||
| SUPFAM | SSF47576. Calponin-homology. 1 hit. SSF48065. DH-domain. 1 hit. SSF50044. SH3. 2 hits. | ||||||||||||||||||||||||||||||
| PROSITE | PS50021. CH. 1 hit. PS00741. DH_1. 1 hit. PS50010. DH_2. 1 hit. PS50003. PH_DOMAIN. 1 hit. PS50001. SH2. 1 hit. PS50002. SH3. 2 hits. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||
| ChiTaRS | VAV2. human. | ||||||||||||||||||||||||||||||
| EvolutionaryTrace | P52735. | ||||||||||||||||||||||||||||||
| GenomeRNAi | 7410. | ||||||||||||||||||||||||||||||
| NextBio | 29012. | ||||||||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||||||||
Entry information
| Entry name | VAV2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P52735 Secondary accession number(s): A2RUM4 Q6Q317 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
