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P52592

- S1PR2_MOUSE

UniProt

P52592 - S1PR2_MOUSE

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Protein
Sphingosine 1-phosphate receptor 2
Gene
S1pr2, Edg5, Gpcr13, Lpb2
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Receptor for the lysosphingolipid sphingosine 1-phosphate (S1P). S1P is a bioactive lysophospholipid that elicits diverse physiological effect on most types of cells and tissues.

GO - Molecular functioni

  1. sphingosine-1-phosphate receptor activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. negative regulation of excitatory postsynaptic membrane potential Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
Sphingosine 1-phosphate receptor 2
Short name:
S1P receptor 2
Short name:
S1P2
Alternative name(s):
Endothelial differentiation G-protein coupled receptor 5
Lysophospholipid receptor B2
Sphingosine 1-phosphate receptor Edg-5
Short name:
S1P receptor Edg-5
Gene namesi
Name:S1pr2
Synonyms:Edg5, Gpcr13, Lpb2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 9

Organism-specific databases

MGIiMGI:99569. S1pr2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 3434Extracellular By similarity
Add
BLAST
Transmembranei35 – 5925Helical; Name=1; By similarity
Add
BLAST
Topological domaini60 – 667Cytoplasmic By similarity
Transmembranei67 – 9529Helical; Name=2; By similarity
Add
BLAST
Topological domaini96 – 10914Extracellular By similarity
Add
BLAST
Transmembranei110 – 12819Helical; Name=3; By similarity
Add
BLAST
Topological domaini129 – 14719Cytoplasmic By similarity
Add
BLAST
Transmembranei148 – 17326Helical; Name=4; By similarity
Add
BLAST
Topological domaini174 – 18916Extracellular By similarity
Add
BLAST
Transmembranei190 – 21021Helical; Name=5; By similarity
Add
BLAST
Topological domaini211 – 23323Cytoplasmic By similarity
Add
BLAST
Transmembranei234 – 25522Helical; Name=6; By similarity
Add
BLAST
Topological domaini256 – 27116Extracellular By similarity
Add
BLAST
Transmembranei272 – 29221Helical; Name=7; By similarity
Add
BLAST
Topological domaini293 – 35260Cytoplasmic By similarity
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 352352Sphingosine 1-phosphate receptor 2
PRO_0000069428Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi19 – 191N-linked (GlcNAc...)2 Publications
Lipidationi305 – 3051S-palmitoyl cysteine By similarity

Keywords - PTMi

Glycoprotein, Lipoprotein, Palmitate

Proteomic databases

PaxDbiP52592.
PRIDEiP52592.

PTM databases

PhosphoSiteiP52592.

Expressioni

Tissue specificityi

Most abundant in heart and lung; low, but clearly observed in kidney, liver and thymus; much lower but detectable in brain, testis, stomach and intestine. Not significantly detected in any of the sections of embryonic day (E) 14-18, except in embryonic brain.1 Publication

Gene expression databases

BgeeiP52592.
GenevestigatoriP52592.

Interactioni

Protein-protein interaction databases

DIPiDIP-60681N.
STRINGi10090.ENSMUSP00000053394.

Structurei

3D structure databases

ProteinModelPortaliP52592.
SMRiP52592. Positions 6-301.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG149362.
GeneTreeiENSGT00750000117544.
HOGENOMiHOG000233501.
HOVERGENiHBG103071.
InParanoidiQ8C3Q7.
KOiK04292.
OMAiKFHSAMY.
OrthoDBiEOG708W0B.
TreeFamiTF330052.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR004063. EDG5_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR004061. S1P_rcpt.
[Graphical view]
PANTHERiPTHR22750:SF17. PTHR22750:SF17. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR01525. EDG5RECEPTOR.
PR00237. GPCRRHODOPSN.
PR01523. S1PRECEPTOR.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52592-1 [UniParc]FASTAAdd to Basket

« Hide

MGGLYSEYLN PEKVLEHYNY TKETLDMQET TSRKVASAFI IILCCAIVVE    50
NLLVLIAVAR NSKFHSAMYL FLGNLAASDL LAGVAFVANT LLSGHVTLSL 100
TPVQWFAREG SAFITLSASV FSLLAIAIER QVALAKVKLY GSDKSCRMLM 150
LIGASWLISL ILGGLPILGW NCLNQLEACS TVLPLYAKHY VLCVVTIFSV 200
ILLAIVALYV RIYFVVRSSH ADVAGPQTLA LLKTVTIVLG VFIICWLPAF 250
SILLLDSTCP VRACPVLYKA HYFFAFATLN SLLNPVIYTW RSRDLRREVL 300
RPLQCWRRGK GVTGRRGGNP GHRLLPLRSS SSLERGMHMP TSPTFLEGNT 350
VV 352
Length:352
Mass (Da):38,829
Last modified:July 27, 2011 - v3
Checksum:i6A3E426B0FE54406
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti110 – 1101G → V in AAD16976. 1 Publication
Sequence conflicti110 – 1101G → V in AAA16846. 1 Publication
Sequence conflicti166 – 1661P → S in AAA16846. 1 Publication
Sequence conflicti175 – 1751Q → K in AAA16846. 1 Publication
Sequence conflicti189 – 1891H → R in AAA16846. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF108020 Genomic DNA. Translation: AAD16976.1.
AK085114 mRNA. Translation: BAC39368.1.
AK134275 mRNA. Translation: BAE22078.1.
AK151062 mRNA. Translation: BAE30079.1.
AK159605 mRNA. Translation: BAE35224.1.
AK170436 mRNA. Translation: BAE41795.1.
CH466522 Genomic DNA. Translation: EDL25146.1.
BC096760 mRNA. Translation: AAH96760.1.
L20334 mRNA. Translation: AAA16846.1.
CCDSiCCDS22888.1.
PIRiE48909.
RefSeqiNP_034463.2. NM_010333.4.
XP_006510082.1. XM_006510019.1.
UniGeneiMm.46493.

Genome annotation databases

EnsembliENSMUST00000054197; ENSMUSP00000053394; ENSMUSG00000043895.
GeneIDi14739.
KEGGimmu:14739.
UCSCiuc009ojt.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF108020 Genomic DNA. Translation: AAD16976.1 .
AK085114 mRNA. Translation: BAC39368.1 .
AK134275 mRNA. Translation: BAE22078.1 .
AK151062 mRNA. Translation: BAE30079.1 .
AK159605 mRNA. Translation: BAE35224.1 .
AK170436 mRNA. Translation: BAE41795.1 .
CH466522 Genomic DNA. Translation: EDL25146.1 .
BC096760 mRNA. Translation: AAH96760.1 .
L20334 mRNA. Translation: AAA16846.1 .
CCDSi CCDS22888.1.
PIRi E48909.
RefSeqi NP_034463.2. NM_010333.4.
XP_006510082.1. XM_006510019.1.
UniGenei Mm.46493.

3D structure databases

ProteinModelPortali P52592.
SMRi P52592. Positions 6-301.
ModBasei Search...

Protein-protein interaction databases

DIPi DIP-60681N.
STRINGi 10090.ENSMUSP00000053394.

Chemistry

GuidetoPHARMACOLOGYi 276.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei P52592.

Proteomic databases

PaxDbi P52592.
PRIDEi P52592.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000054197 ; ENSMUSP00000053394 ; ENSMUSG00000043895 .
GeneIDi 14739.
KEGGi mmu:14739.
UCSCi uc009ojt.2. mouse.

Organism-specific databases

CTDi 9294.
MGIi MGI:99569. S1pr2.

Phylogenomic databases

eggNOGi NOG149362.
GeneTreei ENSGT00750000117544.
HOGENOMi HOG000233501.
HOVERGENi HBG103071.
InParanoidi Q8C3Q7.
KOi K04292.
OMAi KFHSAMY.
OrthoDBi EOG708W0B.
TreeFami TF330052.

Miscellaneous databases

ChiTaRSi S1PR2. mouse.
NextBioi 286795.
PROi P52592.
SOURCEi Search...

Gene expression databases

Bgeei P52592.
Genevestigatori P52592.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR004063. EDG5_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR004061. S1P_rcpt.
[Graphical view ]
PANTHERi PTHR22750:SF17. PTHR22750:SF17. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR01525. EDG5RECEPTOR.
PR00237. GPCRRHODOPSN.
PR01523. S1PRECEPTOR.
PROSITEi PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Comparative analysis of three murine G-protein coupled receptors activated by sphingosine-1-phosphate."
    Zhang G., Contos J.J.A., Weiner J.A., Fukushima N., Chun J.
    Gene 227:89-99(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY.
    Strain: 129/SvJ.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J and NOD.
    Tissue: Bone marrow, Forelimb and Lung.
  3. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  5. "Identification, chromosomal location, and genome organization of mammalian G-protein-coupled receptors."
    Wilkie T.M., Chen Y., Gilbert D.J., Moore K.J., Yu L., Simon M.I., Copeland N.G., Jenkins N.A.
    Genomics 18:175-184(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 62-241.
    Tissue: Testis.
  6. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  7. "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation."
    Gundry R.L., Raginski K., Tarasova Y., Tchernyshyov I., Bausch-Fluck D., Elliott S.T., Boheler K.R., Van Eyk J.E., Wollscheid B.
    Mol. Cell. Proteomics 8:2555-2569(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-19.
    Tissue: Myoblast.
  8. "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins."
    Wollscheid B., Bausch-Fluck D., Henderson C., O'Brien R., Bibel M., Schiess R., Aebersold R., Watts J.D.
    Nat. Biotechnol. 27:378-386(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-19.

Entry informationi

Entry nameiS1PR2_MOUSE
AccessioniPrimary (citable) accession number: P52592
Secondary accession number(s): Q8C3Q7, Q9R236
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 115 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi