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P52521 (VU4_HHV7J) Reviewed, UniProtKB/Swiss-Prot

Last modified February 8, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein U4
Gene names
Name:U4
OrganismHuman herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) [Complete proteome]
Taxonomic identifier57278 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeRoseolovirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the herpesviridae U4 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 542542Protein U4
PRO_0000116309

Sequences

Sequence LengthMass (Da)Tools
P52521 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 307C4AB420D6A7FA

FASTA54263,030
        10         20         30         40         50         60 
MDLIDYDVCK GPLRNRITYV IPNHPYLSWT AFNSCELDVN LNELTEEMIA DSGHLTSEDL 

        70         80         90        100        110        120 
FQTRGLKFYD DSLLWAVLVE KNSVSFKRRD KATMTLDGFL AFLQSLRFEE CTSPFYRVLT 

       130        140        150        160        170        180 
KATALAHFTI AEYFVAGEKR DTLSSHFNRL MELLDSLFLQ FFMLRNRCDS NILLSLFELL 

       190        200        210        220        230        240 
PNPKEIAGEV VAPSNLLLKN FLDDKIFFSF VMNYHFVVSN LCSCGECRKA LFSRFLKRRE 

       250        260        270        280        290        300 
RGVLHLSDIQ DFSPQDLILQ QLHLTNDEAL RVRESIDKDL GAELILKAME SKTLPILHDE 

       310        320        330        340        350        360 
ILGNSHLERN ILKIYCNIIL CLFLARRVRE RISRDLDKIA RFFAQSLVFL EIRILPFEGV 

       370        380        390        400        410        420 
ENVCRKLAVL GSHFSSHNVM SIPRHCSAFL EVASILVASY SKQNHRVRAL LEHLCQKKVA 

       430        440        450        460        470        480 
LTCSCFLLHL ARELRHDILE GFTNPLKLHY MDNPVRFFRC QDCNLYGTHL WSGLFPNVVP 

       490        500        510        520        530        540 
HAVRGGGSFE VRIFEHRMRQ RRVSVRKRLF KESQHRGFTI RQSRRIPRLA FCPFAKPVHK 


DY 

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References

[1]"Determination and analysis of the complete nucleotide sequence of human herpesvirus."
Nicholas J.
J. Virol. 70:5975-5989(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U43400 Genomic DNA. Translation: AAC54668.1.
PIRT41908.
RefSeqYP_073748.1. NC_001716.2.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3289466.

Phylogenomic databases

ProtClustDBCLSP2510043.

Family and domain databases

InterProIPR010302. U5-like_protein_herpesevirus.
[Graphical view]
PfamPF05999. Herpes_U5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVU4_HHV7J
AccessionPrimary (citable) accession number: P52521
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: February 8, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families