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P52469 (UL79_HHV6U) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein U52
Gene names
Name:U52
Synonyms:XKLF1
OrganismHuman herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) [Reference proteome]
Taxonomic identifier10370 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeRoseolovirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the herpesviridae UL79 family.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 258258Protein U52
PRO_0000116222

Sequences

Sequence LengthMass (Da)Tools
P52469 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 7F102B088E459FF2

FASTA25830,030
        10         20         30         40         50         60 
MTQIGQYIKL NDAVPNLILH ITTKLLRNEN LTSFKQEELL LIQHVCTSML SHGIKILLLR 

        70         80         90        100        110        120 
ESLYNSGIGD IVILNRKISN NYWFRIFSIL KQHSDAELLR HMFNESHSAY ISKKLHYSGN 

       130        140        150        160        170        180 
VSHMINFLFM DEFGVNLKIP EELICEGNIV FSVGAIYNHR LLKICRFFNR FWGDQEREPT 

       190        200        210        220        230        240 
VRLICKHLWF AYLIMFGKFE ISTLAYSQQR AEHKAGLFSF LQNDFKVFCG MSENPQLLDS 

       250 
SAIFDLTGIS AEDLFSYE 

« Hide

References

[1]"The DNA sequence of human herpesvirus-6: structure, coding content, and genome evolution."
Gompels U.A., Nicholas J., Lawrence G.L., Jones M., Thomson B.J., Martin M.E.D., Efstathiou S., Craxton M.A., Macaulay H.A.
Virology 209:29-51(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X83413 Genomic DNA. Translation: CAA58386.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

ProtClustDBPHA3364.

Family and domain databases

InterProIPR004290. Herpes_UL79.
[Graphical view]
PfamPF03049. Herpes_UL79. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameUL79_HHV6U
AccessionPrimary (citable) accession number: P52469
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 3, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families