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P52400

- E131_SOLTU

UniProt

P52400 - E131_SOLTU

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Protein

Glucan endo-1,3-beta-glucosidase, basic isoform 1

Gene

GLUB1

Organism
Solanum tuberosum (Potato)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Is thought to be an important plant defense-related product against fungal pathogens.

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei239 – 2391NucleophileBy similarity
Active sitei295 – 2951Proton donorBy similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Plant defense

Protein family/group databases

CAZyiGH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase, basic isoform 1 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase
Short name:
(1->3)-beta-glucanase
Beta-1,3-endoglucanase
Gene namesi
Name:GLUB1
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
ProteomesiUP000011115: Unplaced

Subcellular locationi

Vacuole By similarity

GO - Cellular componenti

  1. vacuole Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Vacuole

Pathology & Biotechi

Protein family/group databases

Allergomei2551. Sola t Glucanase.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 314›314Glucan endo-1,3-beta-glucosidase, basic isoform 1PRO_0000011860Add
BLAST
Propeptidei315 – 33723Removed in mature formBy similarityPRO_0000011861Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi327 – 3271N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Expressioni

Developmental stagei

Highest levels in old segments of leaves, stems and roots.

Inductioni

In leaves, in response to infection, elicitor, ethylene, or wounding.

Structurei

3D structure databases

ProteinModelPortaliP52400.
SMRiP52400. Positions 1-313.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Phylogenomic databases

InParanoidiP52400.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Sequence processingi: The displayed sequence is further processed into a mature form.

P52400-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
LGVCYGMMGN NLPSHSEVIQ LYKSRNIGRL RLYDPNHGAL NALRGSNIEV
60 70 80 90 100
ILGLPNVDVK HIASGMEHAR WWVQKNVKDF WPDVKIKYIA VGNEISPVTG
110 120 130 140 150
TSSLTSFQVP ALVNIYKAVG EAGLGNDIKV STSVDMTLIG NSYPPSQGSF
160 170 180 190 200
RNDVRWFTDP IVGFLRDTRA PLLVNIYPYF SYSGNPGQIS LPYALFTAPN
210 220 230 240 250
AVVQDGSRQY RNLFDAMLDS VYAAMERTGG GSVGIVVSES GWPSAGAFGA
260 270 280 290 300
TQDNAATYLR NLIQHAKEGS PRKPGPIETY IFAMFDENNK NPELEKHFGL
310 320 330
FSPNKQPKYN LNFGVSERVW DISAETNSTA SSLISEM
Length:337
Mass (Da):37,022
Last modified:October 1, 1996 - v1
Checksum:i6787E5C69528F996
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U01900 mRNA. Translation: AAA88794.1.
PIRiS65022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U01900 mRNA. Translation: AAA88794.1 .
PIRi S65022.

3D structure databases

ProteinModelPortali P52400.
SMRi P52400. Positions 1-313.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 2551. Sola t Glucanase.
CAZyi GH17. Glycoside Hydrolase Family 17.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

InParanoidi P52400.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00332. Glyco_hydro_17. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Primary structure and expression of mRNAs encoding basic chitinase and 1,3-beta-glucanase in potato."
    Beerhues L., Kombrink E.
    Plant Mol. Biol. 24:353-367(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Datura.
    Tissue: Leaf.

Entry informationi

Entry nameiE131_SOLTU
AccessioniPrimary (citable) accession number: P52400
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3