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P52276

- SYN_SYNY3

UniProt

P52276 - SYN_SYNY3

Protein

Asparagine--tRNA ligase

Gene

asnS

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 105 (01 Oct 2014)
      Sequence version 2 (31 Jan 2002)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn).UniRule annotation

    GO - Molecular functioni

    1. asparagine-tRNA ligase activity Source: UniProtKB-EC
    2. ATP binding Source: UniProtKB-KW
    3. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. asparaginyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Asparagine--tRNA ligaseUniRule annotation (EC:6.1.1.22UniRule annotation)
    Alternative name(s):
    Asparaginyl-tRNA synthetaseUniRule annotation
    Short name:
    AsnRSUniRule annotation
    Gene namesi
    Name:asnSUniRule annotation
    Ordered Locus Names:sll0495
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 462462Asparagine--tRNA ligasePRO_0000176468Add
    BLAST

    Proteomic databases

    PaxDbiP52276.
    PRIDEiP52276.

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    IntActiP52276. 1 interaction.
    STRINGi1148.sll0495.

    Structurei

    3D structure databases

    ProteinModelPortaliP52276.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0017.
    HOGENOMiHOG000226033.
    KOiK01893.
    OMAiGADLHTE.
    PhylomeDBiP52276.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    HAMAPiMF_00534. Asn_tRNA_synth.
    InterProiIPR004364. aa-tRNA-synt_II.
    IPR018150. aa-tRNA-synt_II-like.
    IPR006195. aa-tRNA-synth_II.
    IPR004522. Asn-tRNA-ligase.
    IPR002312. Asp/Asn-tRNA-synth_IIb.
    IPR012340. NA-bd_OB-fold.
    IPR004365. NA-bd_OB_tRNA.
    [Graphical view]
    PANTHERiPTHR22594. PTHR22594. 1 hit.
    PfamiPF00152. tRNA-synt_2. 1 hit.
    PF01336. tRNA_anti-codon. 1 hit.
    [Graphical view]
    PRINTSiPR01042. TRNASYNTHASP.
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00457. asnS. 1 hit.
    PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P52276-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKRRIIEVL RHGQADDQVM VQGWLRTKRT LKDFSFVEVN DGSSLANLQV    50
    VLDGSLADYD RLLSQLQTGA ALVVEGKLAP SPGKGQRVEL KATKLELLGG 100
    ADPGSYPLQK KRHSFEFLRT IGHLRPRTNT IGAVMRVRNA CATAIHQFFQ 150
    ERGFLWVHTP IITASDCEGA GDLFKVTTLD LQRVPKNGEG IDYSQDFFGK 200
    QAYLTVSGQL EAEVMALAFQ NVYTFGPTFR AENSNTSRHL AEFWMVEPEM 250
    AFCDLEGDRQ WAEEFLKYIF KFVLEKCPED MEFFDQRIDN TVLATADNII 300
    NNEFAWLTYS EAIKLLEKAD QKFEYPVAWG VDLQSEHERY LAETVFKRPT 350
    IVTDYPKDIK AFYMRLNDDG KTVAAMDILA PKIGEIIGGS QREERLDILT 400
    QRMQEQGVPE EDLWWYLDLR RYGSVPHAGF GLGFERIVQF MTGMANIRDV 450
    IPFPRTPMNA EF 462
    Length:462
    Mass (Da):52,699
    Last modified:January 31, 2002 - v2
    Checksum:i6E177B9BC0F25D1F
    GO

    Sequence cautioni

    The sequence BAA10844.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10844.1. Different initiation.
    PIRiS75997.
    RefSeqiYP_007452649.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10844; BAA10844; BAA10844.
    KEGGisyz:MYO_129070.
    PATRICi23843302. VBISynSp132158_3189.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10844.1 . Different initiation.
    PIRi S75997.
    RefSeqi YP_007452649.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P52276.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P52276. 1 interaction.
    STRINGi 1148.sll0495.

    Proteomic databases

    PaxDbi P52276.
    PRIDEi P52276.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10844 ; BAA10844 ; BAA10844 .
    KEGGi syz:MYO_129070.
    PATRICi 23843302. VBISynSp132158_3189.

    Phylogenomic databases

    eggNOGi COG0017.
    HOGENOMi HOG000226033.
    KOi K01893.
    OMAi GADLHTE.
    PhylomeDBi P52276.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    HAMAPi MF_00534. Asn_tRNA_synth.
    InterProi IPR004364. aa-tRNA-synt_II.
    IPR018150. aa-tRNA-synt_II-like.
    IPR006195. aa-tRNA-synth_II.
    IPR004522. Asn-tRNA-ligase.
    IPR002312. Asp/Asn-tRNA-synth_IIb.
    IPR012340. NA-bd_OB-fold.
    IPR004365. NA-bd_OB_tRNA.
    [Graphical view ]
    PANTHERi PTHR22594. PTHR22594. 1 hit.
    Pfami PF00152. tRNA-synt_2. 1 hit.
    PF01336. tRNA_anti-codon. 1 hit.
    [Graphical view ]
    PRINTSi PR01042. TRNASYNTHASP.
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00457. asnS. 1 hit.
    PROSITEi PS50862. AA_TRNA_LIGASE_II. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
      Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
      DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27184 / PCC 6803 / N-1.
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiSYN_SYNY3
    AccessioniPrimary (citable) accession number: P52276
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: January 31, 2002
    Last modified: October 1, 2014
    This is version 105 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3