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Protein

Uncharacterized outer membrane protein YpjA

Gene

ypjA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:G7382-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized outer membrane protein YpjA
Gene namesi
Name:ypjA
Ordered Locus Names:b2647, JW5422
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13213 ypjA

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_000020473330 – 1526Uncharacterized outer membrane protein YpjAAdd BLAST1497

Proteomic databases

PaxDbiP52143
PRIDEiP52143

Interactioni

Protein-protein interaction databases

BioGridi4259215, 237 interactors
DIPiDIP-12834N
IntActiP52143, 2 interactors
STRINGi316407.85675506

Structurei

3D structure databases

ProteinModelPortaliP52143
SMRiP52143
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1258 – 1526AutotransporterPROSITE-ProRule annotationAdd BLAST269

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi1184 – 1220Pro-richAdd BLAST37

Keywords - Domaini

Signal, Transmembrane, Transmembrane beta strand

Phylogenomic databases

eggNOGiENOG4108MGN Bacteria
ENOG4110GG4 LUCA
HOGENOMiHOG000009752
InParanoidiP52143
OMAiNHASQTG
PhylomeDBiP52143

Family and domain databases

Gene3Di2.160.20.20, 4 hits
InterProiView protein in InterPro
IPR030930 AIDA
IPR005546 Autotransporte_beta
IPR036709 Autotransporte_beta_dom_sf
IPR006315 OM_autotransptr_brl
IPR012332 P22_tailspike-like_C_sf
IPR011050 Pectin_lyase_fold/virulence
IPR004899 Pertactin_central
IPR003991 Pertactin_virulence_factor
PfamiView protein in Pfam
PF16168 AIDA, 6 hits
PF03797 Autotransporter, 1 hit
PF03212 Pertactin, 1 hit
PRINTSiPR01484 PRTACTNFAMLY
SMARTiView protein in SMART
SM00869 Autotransporter, 1 hit
SUPFAMiSSF103515 SSF103515, 1 hit
SSF51126 SSF51126, 1 hit
TIGRFAMsiTIGR01414 autotrans_barl, 1 hit
TIGR04415 O_hepto_targRPT, 6 hits
PROSITEiView protein in PROSITE
PS51208 AUTOTRANSPORTER, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P52143-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRTSPYYCR RSVLSLLISA LIYAPPGMAA FTTNVIGVVN DETVDGNQKV
60 70 80 90 100
DERGTTNNTH IINHGQQNVH GGVSNGSLIE SGGYQDIGSH NNFVGQANNT
110 120 130 140 150
TINGGRQSIH DGGISTGTTI ESGNQDVYKG GISNGTTIKG GASRVEGGSA
160 170 180 190 200
NGILIDGGSQ IVKVQGHADG TTINKSGSQD VVQGSLATNT TINGGRQYVE
210 220 230 240 250
QSTVETTTIK NGGEQRVYES RALDTTIEGG TQSLNSKSTA KNTHIYSGGT
260 270 280 290 300
QIVDNTSTSD VIEVYSGGVL DVRGGTATNV TQHDGAILKT NTNGTTVSGT
310 320 330 340 350
NSEGAFSIHN HVADNVLLEN GGHLDINAYG SANKTIIKDK GTMSVLTNAK
360 370 380 390 400
ADATRIDNGG VMDVAGNATN TIINGGTQNI NNYGIATGTN INSGTQNIKS
410 420 430 440 450
GGKADTTIIS SGSRQVVEKD GTAIGSNISA GGSLIVYTGG IAHGVNQETG
460 470 480 490 500
SALVANTGAG TDIEGYNKLS HFTITGGEAN YVVLENTGEL TVVAKTSAKN
510 520 530 540 550
TTIDTGGKLI VQKEAKTDST RLNNGGVLEV QDGGEAKHVE QQSGGALIAS
560 570 580 590 600
TTSGTLIEGT NSYGDAFYIR NSEAKNVVLE NAGSLTVVTG SRAVDTIINA
610 620 630 640 650
NGKMDVYGKD VGTVLNSAGT QTIYASATSD KANIKGGKQT VYGLATEANI
660 670 680 690 700
ESGEQIVDGG STEKTHINGG TQTVQNYGKA INTDIVSGLQ QIMANGTAEG
710 720 730 740 750
SIINGGSQVV NEGGLAENSV LNDGGTLDVR EKGSATGIQQ SSQGALVATT
760 770 780 790 800
RATRVTGTRA DGVAFSIEQG AANNILLANG GVLTVESDTS SDKTQVNMGG
810 820 830 840 850
REIVKTKATA TGTTLTGGEQ IVEGVANETT INDGGIQTVS ANGEAIKTKI
860 870 880 890 900
NEGGTLTVND NGKATDIVQN SGAALQTSTA NGIEISGTHQ YGTFSISGNL
910 920 930 940 950
ATNMLLENGG NLLVLAGTEA RDSTVGKGGA MQNLGQDSAT KVNSGGQYTL
960 970 980 990 1000
GRSKDEFQAL ARAEDLQVAG GTAIVYAGTL ADASVSGATG SLSLMTPRDN
1010 1020 1030 1040 1050
VTPVKLEGAV RITDSATLTL GNGVDTTLAD LTAASRGSVW LNSNNSCAGT
1060 1070 1080 1090 1100
SNCEYRVNSL LLNDGDVYLS AQTAAPATTN GIYNTLTTNE LSGSGNFYLH
1110 1120 1130 1140 1150
TNVAGSRGDQ LVVNNNATGN FKIFVQDTGV SPQSDDAMTL VKTGGGDASF
1160 1170 1180 1190 1200
TLGNTGGFVD LGTYEYVLKS DGNSNWNLTN DVKPNPDPIP NPKPDPKPDP
1210 1220 1230 1240 1250
KPDPNPKPDP TPDPTPTPVP EKRITPSTAA VLNMAATLPL VFDAELNSIR
1260 1270 1280 1290 1300
ERLNIMKASP HNNNVWGATY NTRNNVTTDA GAGFEQTLTG MTVGIDSRND
1310 1320 1330 1340 1350
IPEGITTLGA FMGYSHSHIG FDRGGHGSVG SYSLGGYASW EHESGFYLDG
1360 1370 1380 1390 1400
VVKLNRFKSN VAGKMSSGGA ANGSYHSNGL GGHIETGMRF TDGNWNLTPY
1410 1420 1430 1440 1450
ASLTGFTADN PEYHLSNGMK SKSVDTRSIY RELGATLSYN MRLGNGMEVE
1460 1470 1480 1490 1500
PWLKAAVRKE FVDDNRVKVN SDGNFVNYLS GRRGIYQAGI KASFSSTLSG
1510 1520
HLGVGYSHSA GVESPWNAVA GVNWSF
Length:1,526
Mass (Da):157,500
Last modified:November 13, 2007 - v3
Checksum:iF8EEEFA907364EB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA Translation: AAA79815.1 Sequence problems.
U00096 Genomic DNA Translation: AAC75695.2
AP009048 Genomic DNA Translation: BAA16514.2
PIRiA65044
RefSeqiNP_417134.2, NC_000913.3
WP_010723187.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75695; AAC75695; b2647
BAA16514; BAA16514; BAA16514
GeneIDi948630
KEGGiecj:JW5422
eco:b2647
PATRICifig|1411691.4.peg.4091

Similar proteinsi

Entry informationi

Entry nameiYPJA_ECOLI
AccessioniPrimary (citable) accession number: P52143
Secondary accession number(s): P76610, P77017, P77019
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: November 13, 2007
Last modified: March 28, 2018
This is version 135 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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