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Protein

UPF0758 protein YfjY

Gene

yfjY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7379-MONOMER.
ECOL316407:JW2625-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0758 protein YfjY
Gene namesi
Name:yfjY
Ordered Locus Names:b2644, JW2625
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13211. yfjY.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160UPF0758 protein YfjYPRO_0000190763Add
BLAST

Proteomic databases

PaxDbiP52140.
PRIDEiP52140.

Interactioni

Protein-protein interaction databases

IntActiP52140. 6 interactions.
STRINGi511145.b2644.

Structurei

3D structure databases

ProteinModelPortaliP52140.
SMRiP52140. Positions 43-160.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0758 family.Curated

Phylogenomic databases

eggNOGiENOG4108XS9. Bacteria.
COG2003. LUCA.
HOGENOMiHOG000273376.
InParanoidiP52140.
KOiK03630.
OMAiILDEKVM.
PhylomeDBiP52140.

Family and domain databases

InterProiIPR001405. RadC.
IPR025657. RadC_JAB.
IPR020891. UPF0758_CS.
[Graphical view]
PfamiPF04002. RadC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00608. radc. 1 hit.
PROSITEiPS01302. UPF0758. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52140-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMEQSLIPQT PVLPLTAQRT VKRALTLLDR HLRETGVAFT STQAARDWLK
60 70 80 90 100
LKMAGLEREE FMMLYLNQQN QLIAHETLFA GSISSTEVHP REVVKRALYF
110 120 130 140 150
NAAAVILAHN HPSGDTTPSQ ADKTITQRLV QALQLVDIRV PDHLIVGGRQ
160
IYSFAEHGLL
Length:160
Mass (Da):17,964
Last modified:October 1, 1996 - v1
Checksum:i264978E093214F9D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79812.1.
U00096 Genomic DNA. Translation: AAC75692.1.
AP009048 Genomic DNA. Translation: BAA16512.1.
PIRiT08655.
RefSeqiNP_417131.1. NC_000913.3.
WP_001407480.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75692; AAC75692; b2644.
BAA16512; BAA16512; BAA16512.
GeneIDi947125.
KEGGiecj:JW2625.
eco:b2644.
PATRICi32120681. VBIEscCol129921_2739.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79812.1.
U00096 Genomic DNA. Translation: AAC75692.1.
AP009048 Genomic DNA. Translation: BAA16512.1.
PIRiT08655.
RefSeqiNP_417131.1. NC_000913.3.
WP_001407480.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP52140.
SMRiP52140. Positions 43-160.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP52140. 6 interactions.
STRINGi511145.b2644.

Proteomic databases

PaxDbiP52140.
PRIDEiP52140.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75692; AAC75692; b2644.
BAA16512; BAA16512; BAA16512.
GeneIDi947125.
KEGGiecj:JW2625.
eco:b2644.
PATRICi32120681. VBIEscCol129921_2739.

Organism-specific databases

EchoBASEiEB3003.
EcoGeneiEG13211. yfjY.

Phylogenomic databases

eggNOGiENOG4108XS9. Bacteria.
COG2003. LUCA.
HOGENOMiHOG000273376.
InParanoidiP52140.
KOiK03630.
OMAiILDEKVM.
PhylomeDBiP52140.

Enzyme and pathway databases

BioCyciEcoCyc:G7379-MONOMER.
ECOL316407:JW2625-MONOMER.

Miscellaneous databases

PROiP52140.

Family and domain databases

InterProiIPR001405. RadC.
IPR025657. RadC_JAB.
IPR020891. UPF0758_CS.
[Graphical view]
PfamiPF04002. RadC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00608. radc. 1 hit.
PROSITEiPS01302. UPF0758. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFJY_ECOLI
AccessioniPrimary (citable) accession number: P52140
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: September 7, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.