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Protein

Uncharacterized protein YfjX

Gene

yfjX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7378-MONOMER.
ECOL316407:JW2624-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfjX
Gene namesi
Name:yfjX
Ordered Locus Names:b2643, JW2624
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13210. yfjX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 152152Uncharacterized protein YfjXPRO_0000169284Add
BLAST

Proteomic databases

PaxDbiP52139.

Interactioni

Protein-protein interaction databases

BioGridi4262250. 11 interactions.
IntActiP52139. 3 interactions.
STRINGi511145.b2643.

Structurei

3D structure databases

ProteinModelPortaliP52139.
SMRiP52139. Positions 18-152.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the antirestriction protein family.Curated

Phylogenomic databases

eggNOGiENOG4105MFG. Bacteria.
ENOG4111V8R. LUCA.
HOGENOMiHOG000124758.
OMAiELRIGFW.
OrthoDBiEOG69977Z.
PhylomeDBiP52139.

Family and domain databases

InterProiIPR004914. Antirestrict.
[Graphical view]
PfamiPF03230. Antirestrict. 1 hit.
[Graphical view]
ProDomiPD012854. Antirestrict. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P52139-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTQTQYDLV PANGSEFELS VTQVPDEQHI RFWPQHFGTI PQWITLEPRI
60 70 80 90 100
FAWMDRFCDE YCGGIWSFYT LSNGGAFMAP DADGDDKWHL LNGMNGNGAE
110 120 130 140 150
MSAEAAGIAV CLIEYSHHAC LTECDAMTEH YYRLRDYALQ HPESSAIMRI

ID
Length:152
Mass (Da):17,303
Last modified:October 1, 1996 - v1
Checksum:i0CD28B650009C109
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79811.1.
U00096 Genomic DNA. Translation: AAC75691.1.
AP009048 Genomic DNA. Translation: BAA16511.1.
PIRiE65043.
RefSeqiNP_417130.1. NC_000913.3.
WP_000211841.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75691; AAC75691; b2643.
BAA16511; BAA16511; BAA16511.
GeneIDi947126.
KEGGiecj:JW2624.
eco:b2643.
PATRICi32120679. VBIEscCol129921_2738.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79811.1.
U00096 Genomic DNA. Translation: AAC75691.1.
AP009048 Genomic DNA. Translation: BAA16511.1.
PIRiE65043.
RefSeqiNP_417130.1. NC_000913.3.
WP_000211841.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP52139.
SMRiP52139. Positions 18-152.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262250. 11 interactions.
IntActiP52139. 3 interactions.
STRINGi511145.b2643.

Proteomic databases

PaxDbiP52139.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75691; AAC75691; b2643.
BAA16511; BAA16511; BAA16511.
GeneIDi947126.
KEGGiecj:JW2624.
eco:b2643.
PATRICi32120679. VBIEscCol129921_2738.

Organism-specific databases

EchoBASEiEB3002.
EcoGeneiEG13210. yfjX.

Phylogenomic databases

eggNOGiENOG4105MFG. Bacteria.
ENOG4111V8R. LUCA.
HOGENOMiHOG000124758.
OMAiELRIGFW.
OrthoDBiEOG69977Z.
PhylomeDBiP52139.

Enzyme and pathway databases

BioCyciEcoCyc:G7378-MONOMER.
ECOL316407:JW2624-MONOMER.

Miscellaneous databases

PROiP52139.

Family and domain databases

InterProiIPR004914. Antirestrict.
[Graphical view]
PfamiPF03230. Antirestrict. 1 hit.
[Graphical view]
ProDomiPD012854. Antirestrict. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
    Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
    , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
    DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFJX_ECOLI
AccessioniPrimary (citable) accession number: P52139
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: January 20, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.