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Protein

Uncharacterized protein YfjW

Gene

yfjW

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7377-MONOMER.
ECOL316407:JW2623-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfjW
Gene namesi
Name:yfjW
Ordered Locus Names:b2642, JW2623
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13209. yfjW.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 40HelicalSequence analysisAdd BLAST21
Transmembranei69 – 89HelicalSequence analysisAdd BLAST21
Transmembranei95 – 115HelicalSequence analysisAdd BLAST21
Transmembranei126 – 146HelicalSequence analysisAdd BLAST21
Transmembranei168 – 188HelicalSequence analysisAdd BLAST21
Transmembranei528 – 548HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001692831 – 567Uncharacterized protein YfjWAdd BLAST567

Proteomic databases

PaxDbiP52138.
PRIDEiP52138.

Interactioni

Protein-protein interaction databases

BioGridi4260634. 13 interactors.
DIPiDIP-12088N.
IntActiP52138. 2 interactors.
MINTiMINT-1308072.
STRINGi511145.b2642.

Structurei

3D structure databases

ProteinModelPortaliP52138.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410YF06. LUCA.

Sequencei

Sequence statusi: Complete.

P52138-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFVSEREIV RKIFSKKIDF TILAFFYISS IFFLLCSGVL FQYFTAAFTK
60 70 80 90 100
GNCYECSMKL DYIKQFYFSL ETAWYLISAV AVFIASVFIQ HRIKAYLTLL
110 120 130 140 150
AITWIVLTIT DVALIHALDN IAMNNILLNI LYNLFGAILL SLFMCLSNSL
160 170 180 190 200
LFHLNKIKHI PMILSAMIPL VSAIIIAILI TAVIYLLFAR QAVEIEMDIS
210 220 230 240 250
EGSDIAYVGV KDNEESFGFL NDKKTDTPTY LDVIKNGSLI YNDTQGLSGA
260 270 280 290 300
DIYIVSGCYA LPDLLRNVPL DAKKSFLNVK KLEITQKLPM MGFIQGESAD
310 320 330 340 350
VMPKAASRLS LSKQDDKFML ASSVTDSQIK FKSNNAQLMV AFAFMPITTN
360 370 380 390 400
GILHDYTYDI IINDKKYKIE NHVAPLSRLD KNKKMKCEYQ QISDLTNTYN
410 420 430 440 450
INANYLTGFL LVLKPDDIIN YNNSPSVLLK TDFAFYKKTY QKLDKIYDDI
460 470 480 490 500
SNGKLSSLRA TGISQFSING KHLSLRPESE IIISEGSLYG LVNKSKKIKI
510 520 530 540 550
YGTADLVFVD NKIMNLRKIT YLQSKLEIFG SSIMDILKYI FGLGLLAISI
560
KFIHSYFKND VNENLFL
Length:567
Mass (Da):64,196
Last modified:November 1, 1997 - v2
Checksum:i0C6DDD0C4B554431
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti235K → T in AAA79810 (PubMed:9278503).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79810.1.
U00096 Genomic DNA. Translation: AAC75690.1.
AP009048 Genomic DNA. Translation: BAA16510.1.
PIRiD65043.
T08653.
RefSeqiNP_417129.1. NC_000913.3.
WP_000896263.1. NZ_CP014272.1.

Genome annotation databases

EnsemblBacteriaiAAC75690; AAC75690; b2642.
BAA16510; BAA16510; BAA16510.
GeneIDi947128.
KEGGiecj:JW2623.
eco:b2642.
PATRICi32120675. VBIEscCol129921_2736.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79810.1.
U00096 Genomic DNA. Translation: AAC75690.1.
AP009048 Genomic DNA. Translation: BAA16510.1.
PIRiD65043.
T08653.
RefSeqiNP_417129.1. NC_000913.3.
WP_000896263.1. NZ_CP014272.1.

3D structure databases

ProteinModelPortaliP52138.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260634. 13 interactors.
DIPiDIP-12088N.
IntActiP52138. 2 interactors.
MINTiMINT-1308072.
STRINGi511145.b2642.

Proteomic databases

PaxDbiP52138.
PRIDEiP52138.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75690; AAC75690; b2642.
BAA16510; BAA16510; BAA16510.
GeneIDi947128.
KEGGiecj:JW2623.
eco:b2642.
PATRICi32120675. VBIEscCol129921_2736.

Organism-specific databases

EchoBASEiEB3001.
EcoGeneiEG13209. yfjW.

Phylogenomic databases

eggNOGiENOG410YF06. LUCA.

Enzyme and pathway databases

BioCyciEcoCyc:G7377-MONOMER.
ECOL316407:JW2623-MONOMER.

Miscellaneous databases

PROiP52138.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYFJW_ECOLI
AccessioniPrimary (citable) accession number: P52138
Secondary accession number(s): P77016
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.