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Protein

UPF0380 protein YfjQ

Gene

yfjQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7368-MONOMER.
ECOL316407:JW2614-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0380 protein YfjQ
Gene namesi
Name:yfjQ
Ordered Locus Names:b2633, JW2614
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13203. yfjQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 273273UPF0380 protein YfjQPRO_0000169282Add
BLAST

Proteomic databases

PaxDbiP52132.
PRIDEiP52132.

Interactioni

Protein-protein interaction databases

BioGridi4262017. 15 interactions.
IntActiP52132. 2 interactions.
STRINGi511145.b2633.

Structurei

3D structure databases

ProteinModelPortaliP52132.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0380 family.Curated

Phylogenomic databases

eggNOGiENOG4106H6R. Bacteria.
ENOG410XPYV. LUCA.
HOGENOMiHOG000222632.
OMAiHPLSDDQ.
OrthoDBiEOG61KBFD.
PhylomeDBiP52132.

Family and domain databases

InterProiIPR026325. DUF932.
[Graphical view]
PfamiPF06067. DUF932. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52132-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRLASRFGA ANLIRRDRPL TREELFRVVP SVFSEDKHES RSERYTYIPT
60 70 80 90 100
ISLLDSLQRE GFQPFFACQT RVRDPRRREH TKHMLRLRRE GQITGKQVPE
110 120 130 140 150
IILLNSHDGT SSYQMLPGMF RAVCQNGLVC GESFGEVRVP HKGDVVSQVI
160 170 180 190 200
EGAYEVLGIF ERVEEKRDAM QSLLLPPPVQ QALAKAALTY RFGEDHQPVT
210 220 230 240 250
ESQILSPRRW QDESNDLWTT YQRIQENLIK GGLSGRNAKG GRTHTRAVRG
260 270
IDGDVKLNRA LWVMAETLLT QLQ
Length:273
Mass (Da):31,255
Last modified:October 1, 1996 - v1
Checksum:i7AF3791DB7C55D2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79802.1.
U00096 Genomic DNA. Translation: AAC75681.1.
AP009048 Genomic DNA. Translation: BAE76768.1.
PIRiT08645.
RefSeqiNP_417122.1. NC_000913.3.
WP_000197391.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75681; AAC75681; b2633.
BAE76768; BAE76768; BAE76768.
GeneIDi947127.
KEGGiecj:JW2614.
eco:b2633.
PATRICi32120657. VBIEscCol129921_2727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79802.1.
U00096 Genomic DNA. Translation: AAC75681.1.
AP009048 Genomic DNA. Translation: BAE76768.1.
PIRiT08645.
RefSeqiNP_417122.1. NC_000913.3.
WP_000197391.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP52132.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262017. 15 interactions.
IntActiP52132. 2 interactions.
STRINGi511145.b2633.

Proteomic databases

PaxDbiP52132.
PRIDEiP52132.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75681; AAC75681; b2633.
BAE76768; BAE76768; BAE76768.
GeneIDi947127.
KEGGiecj:JW2614.
eco:b2633.
PATRICi32120657. VBIEscCol129921_2727.

Organism-specific databases

EchoBASEiEB2995.
EcoGeneiEG13203. yfjQ.

Phylogenomic databases

eggNOGiENOG4106H6R. Bacteria.
ENOG410XPYV. LUCA.
HOGENOMiHOG000222632.
OMAiHPLSDDQ.
OrthoDBiEOG61KBFD.
PhylomeDBiP52132.

Enzyme and pathway databases

BioCyciEcoCyc:G7368-MONOMER.
ECOL316407:JW2614-MONOMER.

Miscellaneous databases

PROiP52132.

Family and domain databases

InterProiIPR026325. DUF932.
[Graphical view]
PfamiPF06067. DUF932. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFJQ_ECOLI
AccessioniPrimary (citable) accession number: P52132
Secondary accession number(s): Q2MAD8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: January 20, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.