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P52126

- YFJK_ECOLI

UniProt

P52126 - YFJK_ECOLI

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Protein

Uncharacterized protein YfjK

Gene

yfjK

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. response to ionizing radiation Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7362-MONOMER.
ECOL316407:JW2608-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfjK
Gene namesi
Name:yfjK
Ordered Locus Names:b2627, JW2608
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG13197. yfjK.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 729729Uncharacterized protein YfjKPRO_0000169276Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP52126.

Interactioni

Protein-protein interaction databases

DIPiDIP-12076N.
IntActiP52126. 23 interactions.
MINTiMINT-1230544.
STRINGi511145.b2627.

Structurei

3D structure databases

ProteinModelPortaliP52126.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini109 – 271163Helicase ATP-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini297 – 472176Helicase C-terminalPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 helicase ATP-binding domain.PROSITE-ProRule annotation
Contains 1 helicase C-terminal domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1204.
HOGENOMiHOG000036311.
InParanoidiP52126.
OMAiTSTMIEG.
OrthoDBiEOG6FV823.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52126-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTEIYEQAKH SLQGEDFSSF NYLFAVNKLL SNPVSYDLGR DLIVRALDSR
60 70 80 90 100
ERFSEHTTIL KNMVRKSGLF PYLKKEFTSL TPDDLRVLEL YRTPFSDGYV
110 120 130 140 150
FHSMQFHIFD LLKSGQNVVL SAPTSMGKSA IVDSLLGMGT LKRLVLVVPT
160 170 180 190 200
VALADETRRR LQERFGDRYQ IIHHSSQVCH SDQAVYVLTQ ERVNERDDIV
210 220 230 240 250
DIDLFVIDEF YKLAFRQLKS GDIDHQDERV IELNIALSKL LKVSRQFYLT
260 270 280 290 300
GPFVNSIRGL EKLGYPHTFV STDFNTVALD VKTFGIKAND DKAKLKALGE
310 320 330 340 350
IAHACVDATI IYCKSPTVAG LVARELIRLG HGTPTENPHV DWVSEEFDAD
360 370 380 390 400
WDYTVALRNG IGLHFGALPR ALQQYTADQF NAGKLRFLLC TSTIIEGVNT
410 420 430 440 450
IAKNVVIYDN RDGTRSIDKF THGNIKGRAG RMGVHFVGKI FCLEEIPEDN
460 470 480 490 500
LNQEVDIPLG IQGIDTPINL LASVQPDHLS EFSQDRFDEV FINDRVSIDL
510 520 530 540 550
VKKHSYFRVE QFEMLQSMFE MMDDNEFSSL VFHWTPATNF LKTFAKIIAR
560 570 580 590 600
LVPHTFSRNG VPVKPTDVMI AKLAGYLSAE SYSEYLKNQI DYARQWISEG
610 620 630 640 650
EKRTLSIALN NDLKLITNTF GYTLPKVLSL MEDVVKHHAV KRGIRSKVDY
660 670 680 690 700
THVKLAFESF HLPPGVNALE EIGIPIQTLH RLVDLLEFSD EADVDELSQY
710 720
LRDTQDIWSR SIGYVDQMFI RRALGIRRH
Length:729
Mass (Da):83,062
Last modified:October 1, 1996 - v1
Checksum:iCB65BCD1B36FBFAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79796.1.
U00096 Genomic DNA. Translation: AAC75675.1.
AP009048 Genomic DNA. Translation: BAE76762.1.
PIRiT08639.
RefSeqiNP_417116.1. NC_000913.3.
YP_490848.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75675; AAC75675; b2627.
BAE76762; BAE76762; BAE76762.
GeneIDi12931629.
947111.
KEGGiecj:Y75_p2573.
eco:b2627.
PATRICi32120647. VBIEscCol129921_2722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79796.1 .
U00096 Genomic DNA. Translation: AAC75675.1 .
AP009048 Genomic DNA. Translation: BAE76762.1 .
PIRi T08639.
RefSeqi NP_417116.1. NC_000913.3.
YP_490848.1. NC_007779.1.

3D structure databases

ProteinModelPortali P52126.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-12076N.
IntActi P52126. 23 interactions.
MINTi MINT-1230544.
STRINGi 511145.b2627.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75675 ; AAC75675 ; b2627 .
BAE76762 ; BAE76762 ; BAE76762 .
GeneIDi 12931629.
947111.
KEGGi ecj:Y75_p2573.
eco:b2627.
PATRICi 32120647. VBIEscCol129921_2722.

Organism-specific databases

EchoBASEi EB2989.
EcoGenei EG13197. yfjK.

Phylogenomic databases

eggNOGi COG1204.
HOGENOMi HOG000036311.
InParanoidi P52126.
OMAi TSTMIEG.
OrthoDBi EOG6FV823.

Enzyme and pathway databases

BioCyci EcoCyc:G7362-MONOMER.
ECOL316407:JW2608-MONOMER.

Miscellaneous databases

PROi P52126.

Gene expression databases

Genevestigatori P52126.

Family and domain databases

Gene3Di 3.40.50.300. 2 hits.
InterProi IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view ]
SMARTi SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 2 hits.
PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFJK_ECOLI
AccessioniPrimary (citable) accession number: P52126
Secondary accession number(s): Q2MAE4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 29, 2014
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3