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Protein

Uncharacterized protein YfjK

Gene

yfjK

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. response to ionizing radiation Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7362-MONOMER.
ECOL316407:JW2608-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfjK
Gene namesi
Name:yfjK
Ordered Locus Names:b2627, JW2608
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318 Componenti: Chromosome UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13197. yfjK.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 729729Uncharacterized protein YfjKPRO_0000169276Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP52126.

Interactioni

Protein-protein interaction databases

DIPiDIP-12076N.
IntActiP52126. 23 interactions.
MINTiMINT-1230544.
STRINGi511145.b2627.

Structurei

3D structure databases

ProteinModelPortaliP52126.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini109 – 271163Helicase ATP-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini297 – 472176Helicase C-terminalPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 helicase ATP-binding domain.PROSITE-ProRule annotation
Contains 1 helicase C-terminal domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1204.
HOGENOMiHOG000036311.
InParanoidiP52126.
OMAiTSTMIEG.
OrthoDBiEOG6FV823.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52126-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEIYEQAKH SLQGEDFSSF NYLFAVNKLL SNPVSYDLGR DLIVRALDSR
60 70 80 90 100
ERFSEHTTIL KNMVRKSGLF PYLKKEFTSL TPDDLRVLEL YRTPFSDGYV
110 120 130 140 150
FHSMQFHIFD LLKSGQNVVL SAPTSMGKSA IVDSLLGMGT LKRLVLVVPT
160 170 180 190 200
VALADETRRR LQERFGDRYQ IIHHSSQVCH SDQAVYVLTQ ERVNERDDIV
210 220 230 240 250
DIDLFVIDEF YKLAFRQLKS GDIDHQDERV IELNIALSKL LKVSRQFYLT
260 270 280 290 300
GPFVNSIRGL EKLGYPHTFV STDFNTVALD VKTFGIKAND DKAKLKALGE
310 320 330 340 350
IAHACVDATI IYCKSPTVAG LVARELIRLG HGTPTENPHV DWVSEEFDAD
360 370 380 390 400
WDYTVALRNG IGLHFGALPR ALQQYTADQF NAGKLRFLLC TSTIIEGVNT
410 420 430 440 450
IAKNVVIYDN RDGTRSIDKF THGNIKGRAG RMGVHFVGKI FCLEEIPEDN
460 470 480 490 500
LNQEVDIPLG IQGIDTPINL LASVQPDHLS EFSQDRFDEV FINDRVSIDL
510 520 530 540 550
VKKHSYFRVE QFEMLQSMFE MMDDNEFSSL VFHWTPATNF LKTFAKIIAR
560 570 580 590 600
LVPHTFSRNG VPVKPTDVMI AKLAGYLSAE SYSEYLKNQI DYARQWISEG
610 620 630 640 650
EKRTLSIALN NDLKLITNTF GYTLPKVLSL MEDVVKHHAV KRGIRSKVDY
660 670 680 690 700
THVKLAFESF HLPPGVNALE EIGIPIQTLH RLVDLLEFSD EADVDELSQY
710 720
LRDTQDIWSR SIGYVDQMFI RRALGIRRH
Length:729
Mass (Da):83,062
Last modified:October 1, 1996 - v1
Checksum:iCB65BCD1B36FBFAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79796.1.
U00096 Genomic DNA. Translation: AAC75675.1.
AP009048 Genomic DNA. Translation: BAE76762.1.
PIRiT08639.
RefSeqiNP_417116.1. NC_000913.3.
YP_490848.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75675; AAC75675; b2627.
BAE76762; BAE76762; BAE76762.
GeneIDi12931629.
947111.
KEGGiecj:Y75_p2573.
eco:b2627.
PATRICi32120647. VBIEscCol129921_2722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36840 Genomic DNA. Translation: AAA79796.1.
U00096 Genomic DNA. Translation: AAC75675.1.
AP009048 Genomic DNA. Translation: BAE76762.1.
PIRiT08639.
RefSeqiNP_417116.1. NC_000913.3.
YP_490848.1. NC_007779.1.

3D structure databases

ProteinModelPortaliP52126.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-12076N.
IntActiP52126. 23 interactions.
MINTiMINT-1230544.
STRINGi511145.b2627.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75675; AAC75675; b2627.
BAE76762; BAE76762; BAE76762.
GeneIDi12931629.
947111.
KEGGiecj:Y75_p2573.
eco:b2627.
PATRICi32120647. VBIEscCol129921_2722.

Organism-specific databases

EchoBASEiEB2989.
EcoGeneiEG13197. yfjK.

Phylogenomic databases

eggNOGiCOG1204.
HOGENOMiHOG000036311.
InParanoidiP52126.
OMAiTSTMIEG.
OrthoDBiEOG6FV823.

Enzyme and pathway databases

BioCyciEcoCyc:G7362-MONOMER.
ECOL316407:JW2608-MONOMER.

Miscellaneous databases

PROiP52126.

Gene expression databases

GenevestigatoriP52126.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFJK_ECOLI
AccessioniPrimary (citable) accession number: P52126
Secondary accession number(s): Q2MAE4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: January 7, 2015
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.