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P52126

- YFJK_ECOLI

UniProt

P52126 - YFJK_ECOLI

Protein

Uncharacterized protein YfjK

Gene

yfjK

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 98 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. helicase activity Source: InterPro
    3. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. response to ionizing radiation Source: EcoCyc

    Enzyme and pathway databases

    BioCyciEcoCyc:G7362-MONOMER.
    ECOL316407:JW2608-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YfjK
    Gene namesi
    Name:yfjK
    Ordered Locus Names:b2627, JW2608
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG13197. yfjK.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 729729Uncharacterized protein YfjKPRO_0000169276Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP52126.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-12076N.
    IntActiP52126. 23 interactions.
    MINTiMINT-1230544.
    STRINGi511145.b2627.

    Structurei

    3D structure databases

    ProteinModelPortaliP52126.
    SMRiP52126. Positions 101-167.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini109 – 271163Helicase ATP-bindingPROSITE-ProRule annotationAdd
    BLAST
    Domaini297 – 472176Helicase C-terminalPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 helicase ATP-binding domain.PROSITE-ProRule annotation
    Contains 1 helicase C-terminal domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG1204.
    HOGENOMiHOG000036311.
    OMAiTSTMIEG.
    OrthoDBiEOG6FV823.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00270. DEAD. 1 hit.
    PF00271. Helicase_C. 1 hit.
    [Graphical view]
    SMARTiSM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 2 hits.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P52126-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTEIYEQAKH SLQGEDFSSF NYLFAVNKLL SNPVSYDLGR DLIVRALDSR    50
    ERFSEHTTIL KNMVRKSGLF PYLKKEFTSL TPDDLRVLEL YRTPFSDGYV 100
    FHSMQFHIFD LLKSGQNVVL SAPTSMGKSA IVDSLLGMGT LKRLVLVVPT 150
    VALADETRRR LQERFGDRYQ IIHHSSQVCH SDQAVYVLTQ ERVNERDDIV 200
    DIDLFVIDEF YKLAFRQLKS GDIDHQDERV IELNIALSKL LKVSRQFYLT 250
    GPFVNSIRGL EKLGYPHTFV STDFNTVALD VKTFGIKAND DKAKLKALGE 300
    IAHACVDATI IYCKSPTVAG LVARELIRLG HGTPTENPHV DWVSEEFDAD 350
    WDYTVALRNG IGLHFGALPR ALQQYTADQF NAGKLRFLLC TSTIIEGVNT 400
    IAKNVVIYDN RDGTRSIDKF THGNIKGRAG RMGVHFVGKI FCLEEIPEDN 450
    LNQEVDIPLG IQGIDTPINL LASVQPDHLS EFSQDRFDEV FINDRVSIDL 500
    VKKHSYFRVE QFEMLQSMFE MMDDNEFSSL VFHWTPATNF LKTFAKIIAR 550
    LVPHTFSRNG VPVKPTDVMI AKLAGYLSAE SYSEYLKNQI DYARQWISEG 600
    EKRTLSIALN NDLKLITNTF GYTLPKVLSL MEDVVKHHAV KRGIRSKVDY 650
    THVKLAFESF HLPPGVNALE EIGIPIQTLH RLVDLLEFSD EADVDELSQY 700
    LRDTQDIWSR SIGYVDQMFI RRALGIRRH 729
    Length:729
    Mass (Da):83,062
    Last modified:October 1, 1996 - v1
    Checksum:iCB65BCD1B36FBFAF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U36840 Genomic DNA. Translation: AAA79796.1.
    U00096 Genomic DNA. Translation: AAC75675.1.
    AP009048 Genomic DNA. Translation: BAE76762.1.
    PIRiT08639.
    RefSeqiNP_417116.1. NC_000913.3.
    YP_490848.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75675; AAC75675; b2627.
    BAE76762; BAE76762; BAE76762.
    GeneIDi12931629.
    947111.
    KEGGiecj:Y75_p2573.
    eco:b2627.
    PATRICi32120647. VBIEscCol129921_2722.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U36840 Genomic DNA. Translation: AAA79796.1 .
    U00096 Genomic DNA. Translation: AAC75675.1 .
    AP009048 Genomic DNA. Translation: BAE76762.1 .
    PIRi T08639.
    RefSeqi NP_417116.1. NC_000913.3.
    YP_490848.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P52126.
    SMRi P52126. Positions 101-167.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-12076N.
    IntActi P52126. 23 interactions.
    MINTi MINT-1230544.
    STRINGi 511145.b2627.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75675 ; AAC75675 ; b2627 .
    BAE76762 ; BAE76762 ; BAE76762 .
    GeneIDi 12931629.
    947111.
    KEGGi ecj:Y75_p2573.
    eco:b2627.
    PATRICi 32120647. VBIEscCol129921_2722.

    Organism-specific databases

    EchoBASEi EB2989.
    EcoGenei EG13197. yfjK.

    Phylogenomic databases

    eggNOGi COG1204.
    HOGENOMi HOG000036311.
    OMAi TSTMIEG.
    OrthoDBi EOG6FV823.

    Enzyme and pathway databases

    BioCyci EcoCyc:G7362-MONOMER.
    ECOL316407:JW2608-MONOMER.

    Miscellaneous databases

    PROi P52126.

    Gene expression databases

    Genevestigatori P52126.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00270. DEAD. 1 hit.
    PF00271. Helicase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 2 hits.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

    Entry informationi

    Entry nameiYFJK_ECOLI
    AccessioniPrimary (citable) accession number: P52126
    Secondary accession number(s): Q2MAE4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 98 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3