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Reviewed, UniProtKB/Swiss-Prot P52057 (PROSC_CAEEL)

Last modified November 24, 2009. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Proline synthetase co-transcribed bacterial homolog protein
Gene names
ORF Names: F09E5.8
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity.

Sequence similarities

Belongs to the UPF0001 family.

Ontologies

Keywords
   LigandPyridoxal phosphate
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processembryonic development ending in birth or egg hatching

Inferred from mutant phenotype. Source: WormBase

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 244244Proline synthetase co-transcribed bacterial homolog protein
PRO_0000163212

Amino acid modifications

Modified residue371N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
P52057-1 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 4D6F3F3552A86A5A

FASTA24427,196
        10         20         30         40         50         60 
MSIEIVQKSL FNIIEAVADA VTASQATKRC RLVAVSKTKS ADLIEACYSQ NQRHFGENYV 

        70         80         90        100        110        120 
QELEEKSDVL ASKCLDIRWH FIGQVQSNKI GKICNSPGLW CVETVETEKH ARIFDKEWSK 

       130        140        150        160        170        180 
HGANLSPLRV LVQVNTSGED NKGGIEIGEA PKLAEFIRKE CQNLKFDGFM TIGSFDNSHA 

       190        200        210        220        230        240 
SGENPDFEKL FKVRQTWAEQ TGESADSVEL SMGMSDDFLQ AIHQGATSVR VGSKLFGARE 


YKNK 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

U37429 Genomic DNA. Translation: AAA79348.1.
PIRT15996.
RefSeqNP_495001.1.
UniGeneCel.15476

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGP52057.

Genome annotation databases

EnsemblF09E5.8; F09E5.8; F09E5.8; Caenorhabditis elegans. [Genome view]
GeneID173906.
KEGGcel:F09E5.8.
NMPDRfig|6239.3.peg.5484.
UCSCF09E5.8. c. elegans.

Organism-specific databases

CTD173906.
WormBaseWBGene00017286. F09E5.8.
WormPepF09E5.8. CE02615. [WorfDB]

Phylogenomic databases

OMAHFALTAK

Gene expression databases

ArrayExpressP52057.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. Prd-pyrdxlP-dep_enz_YBL036C.
[Graphical view]
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. PP_YBL036C. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio881615.

Entry information

Entry namePROSC_CAEEL
AccessionPrimary (citable) accession number: P52057
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: November 24, 2009
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents