P52057 (PROSC_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Proline synthase co-transcribed bacterial homolog protein

Gene names

ORF Names:

F09E5.8

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	244 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	embryo development ending in birth or egg hatching Inferred from mutant phenotype. Source: WormBase
Molecular function	pyridoxal phosphate binding Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 244	244	Proline synthase co-transcribed bacterial homolog protein		PRO_0000163212
Amino acid modifications
	Modified residue	37	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	P52057 [UniParc]. Last modified October 1, 1996. Version 1. Checksum: 4D6F3F3552A86A5A	FASTA	244	27,196
	10 20 30 40 50 60 MSIEIVQKSL FNIIEAVADA VTASQATKRC RLVAVSKTKS ADLIEACYSQ NQRHFGENYV 70 80 90 100 110 120 QELEEKSDVL ASKCLDIRWH FIGQVQSNKI GKICNSPGLW CVETVETEKH ARIFDKEWSK 130 140 150 160 170 180 HGANLSPLRV LVQVNTSGED NKGGIEIGEA PKLAEFIRKE CQNLKFDGFM TIGSFDNSHA 190 200 210 220 230 240 SGENPDFEKL FKVRQTWAEQ TGESADSVEL SMGMSDDFLQ AIHQGATSVR VGSKLFGARE YKNK

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO081044 Genomic DNA. Translation: CCD68760.1.
PIR	T15996.
RefSeq	NP_495001.1. NM_062600.4.
UniGene	Cel.15476.
3D structure databases
ProteinModelPortal	P52057.
SMR	P52057. Positions 4-237.
ModBase	Search...
Protein-protein interaction databases
STRING	P52057.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	F09E5.8.1; F09E5.8.1; F09E5.8. F09E5.8.2; F09E5.8.2; F09E5.8.
GeneID	173906.
KEGG	cel:F09E5.8.
NMPDR	fig|6239.3.peg.5484.
UCSC	F09E5.8. c. elegans.
Organism-specific databases
CTD	173906.
WormBase	F09E5.8; CE02615; WBGene00017286.
Phylogenomic databases
eggNOG	meNOG10878.
GeneTree	EMGT00050000017273.
HOGENOM	HBG289671.
InParanoid	P52057.
OMA	AVSKTFE.
PhylomeDB	P52057.
Gene expression databases
ArrayExpress	P52057.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	881615.

Entry information

Entry name

PROSC_CAEEL

Accession

Primary (citable) accession number: P52057

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	October 1, 1996
Last modified:	December 14, 2011
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Caenorhabditis annotation project