Reviewed, UniProtKB/Swiss-Prot P52055 (YPI1_VIBAL)

Names and origin

Protein names	Recommended name:     UPF0001 protein in pilT-proC intergenic region Alternative name(s):     ORF1
Organism	Vibrio alginolyticus
Taxonomic identifier	663 [NCBI]
Taxonomic lineage	Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	233 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 233	233	UPF0001 protein in pilT-proC intergenic region		PRO_0000163208
Amino acid modifications
	Modified residue	36	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	P52055-1 [UniParc]. Last modified October 1, 1996. Version 1. Checksum: 4BEDBC1756E5CAFC	FASTA	233	26,049
	10 20 30 40 50 60 MSSIQQNIEH ITSQIRYDEQ KCGRTPESVQ LLAVSKTKPV EAILEAYQAG QTAFGENYVQ 70 80 90 100 110 120 EGVSKVQHFA EHYPDNRIEW HFIGPIQSNK SRLVAEHFDW VHTIDRTKIA QRLNDQRPSE 130 140 150 160 170 180 LKPLQVLIQV NTSGEASKSG VTEAEVFELA ELISRLPNLT LRGLMSIPAN VSDYESQLHE 190 200 210 220 230 FQKLATLKQT LEAQFPEIDT LSMGMSGDMT AAIEAGSTMV RIGTAIFGAR DYS

References

[1]

"Cloning and sequencing of novel genes from Vibrio alginolyticus that support the growth of K+ uptake-deficient mutant of Escherichia coli." Nakamura T., Katoh Y., Shimizu Y., Matsuba Y., Unemoto T. Biochim. Biophys. Acta 1277:201-208(1996) [PubMed: 8982386] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: 138-2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	D50472 Genomic DNA. Translation: BAA09062.1.
3D structure databases
ModBase	Search...
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. Prd-pyrdxlP-dep_enz_YBL036C. [Graphical view]
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. PP_YBL036C. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YPI1_VIBAL

Accession

Primary (citable) accession number: P52055

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1996
Last sequence update:	October 1, 1996
Last modified:	November 24, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)