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P52052

- YGGR_ECOLI

UniProt

P52052 - YGGR_ECOLI

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Protein

Uncharacterized protein YggR

Gene

yggR

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi127 – 1348ATPSequence Analysis

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7526-MONOMER.
ECOL316407:JW2917-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YggR
Gene namesi
Name:yggR
Ordered Locus Names:b2950, JW2917
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG12978. yggR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 326326Uncharacterized protein YggRPRO_0000207309Add
BLAST

Proteomic databases

PaxDbiP52052.
PRIDEiP52052.

Expressioni

Gene expression databases

GenevestigatoriP52052.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
pykAP215993EBI-552531,EBI-368956

Protein-protein interaction databases

DIPiDIP-12193N.
IntActiP52052. 4 interactions.
MINTiMINT-1260255.
STRINGi511145.b2950.

Structurei

3D structure databases

ProteinModelPortaliP52052.
SMRiP52052. Positions 1-316.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP E family.Curated

Phylogenomic databases

eggNOGiCOG2805.
HOGENOMiHOG000008425.
InParanoidiP52052.
KOiK02669.
OMAiRYRANFF.
OrthoDBiEOG6JMMWM.
PhylomeDBiP52052.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR006321. PilT.
IPR001482. T2SS_protein-E.
[Graphical view]
PfamiPF00437. T2SE. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01420. pilT_fam. 1 hit.
PROSITEiPS00662. T2SP_E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52052-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD TPDVEELLRE
60 70 80 90 100
WLDDDQRAIL LENGQLDFAV SLAENQRLRG SAFAQRHGIS LALRLLPSHC
110 120 130 140 150
PQLEQLGAPT VLPELLKSEN GLILVTGATG SGKSTTLAAM VGYLNQHADA
160 170 180 190 200
HILTLEDPVE YLYASQRCLI QQREIGLHCM TFASGLRAAL REDPDVILLG
210 220 230 240 250
ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS FPAQEKDPVR
260 270 280 290 300
NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH
310 320
VIQTGQQVGM ITFQQSYQHR VGEGRL
Length:326
Mass (Da):35,994
Last modified:October 1, 1996 - v1
Checksum:i54FD0DD877ED18C4
GO

Sequence cautioni

The sequence AAA69117.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U28377 Genomic DNA. Translation: AAA69117.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75987.2.
AP009048 Genomic DNA. Translation: BAE77013.1.
PIRiE65080.
RefSeqiNP_417425.2. NC_000913.3.
YP_491149.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75987; AAC75987; b2950.
BAE77013; BAE77013; BAE77013.
GeneIDi12930248.
947430.
KEGGiecj:Y75_p2880.
eco:b2950.
PATRICi32121312. VBIEscCol129921_3044.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U28377 Genomic DNA. Translation: AAA69117.1 . Different initiation.
U00096 Genomic DNA. Translation: AAC75987.2 .
AP009048 Genomic DNA. Translation: BAE77013.1 .
PIRi E65080.
RefSeqi NP_417425.2. NC_000913.3.
YP_491149.1. NC_007779.1.

3D structure databases

ProteinModelPortali P52052.
SMRi P52052. Positions 1-316.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-12193N.
IntActi P52052. 4 interactions.
MINTi MINT-1260255.
STRINGi 511145.b2950.

Proteomic databases

PaxDbi P52052.
PRIDEi P52052.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75987 ; AAC75987 ; b2950 .
BAE77013 ; BAE77013 ; BAE77013 .
GeneIDi 12930248.
947430.
KEGGi ecj:Y75_p2880.
eco:b2950.
PATRICi 32121312. VBIEscCol129921_3044.

Organism-specific databases

EchoBASEi EB2803.
EcoGenei EG12978. yggR.

Phylogenomic databases

eggNOGi COG2805.
HOGENOMi HOG000008425.
InParanoidi P52052.
KOi K02669.
OMAi RYRANFF.
OrthoDBi EOG6JMMWM.
PhylomeDBi P52052.

Enzyme and pathway databases

BioCyci EcoCyc:G7526-MONOMER.
ECOL316407:JW2917-MONOMER.

Miscellaneous databases

PROi P52052.

Gene expression databases

Genevestigatori P52052.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR006321. PilT.
IPR001482. T2SS_protein-E.
[Graphical view ]
Pfami PF00437. T2SE. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR01420. pilT_fam. 1 hit.
PROSITEi PS00662. T2SP_E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGGR_ECOLI
AccessioniPrimary (citable) accession number: P52052
Secondary accession number(s): P76649, Q2M9P3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 29, 2014
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3