Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P52052 (YGGR_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YggR
Gene names
Name:yggR
Ordered Locus Names:b2950, JW2917
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length326 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the GSP E family.

Sequence caution

The sequence AAA69117.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
   Biological processTransport
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

nucleoside-triphosphatase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

pykAP215993EBI-552531,EBI-368956

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 326326Uncharacterized protein YggR
PRO_0000207309

Regions

Nucleotide binding127 – 1348ATP Potential

Sequences

Sequence LengthMass (Da)Tools
P52052 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: 54FD0DD877ED18C4

FASTA32635,994
        10         20         30         40         50         60 
MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD TPDVEELLRE WLDDDQRAIL 

        70         80         90        100        110        120 
LENGQLDFAV SLAENQRLRG SAFAQRHGIS LALRLLPSHC PQLEQLGAPT VLPELLKSEN 

       130        140        150        160        170        180 
GLILVTGATG SGKSTTLAAM VGYLNQHADA HILTLEDPVE YLYASQRCLI QQREIGLHCM 

       190        200        210        220        230        240 
TFASGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS 

       250        260        270        280        290        300 
FPAQEKDPVR NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH 

       310        320 
VIQTGQQVGM ITFQQSYQHR VGEGRL 

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U28377 Genomic DNA. Translation: AAA69117.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75987.2.
AP009048 Genomic DNA. Translation: BAE77013.1.
PIRE65080.
RefSeqNP_417425.2. NC_000913.3.
YP_491149.1. NC_007779.1.

3D structure databases

ProteinModelPortalP52052.
SMRP52052. Positions 1-316.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-12193N.
IntActP52052. 4 interactions.
MINTMINT-1260255.
STRING511145.b2950.

Proteomic databases

PaxDbP52052.
PRIDEP52052.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75987; AAC75987; b2950.
BAE77013; BAE77013; BAE77013.
GeneID12930248.
947430.
KEGGecj:Y75_p2880.
eco:b2950.
PATRIC32121312. VBIEscCol129921_3044.

Organism-specific databases

EchoBASEEB2803.
EcoGeneEG12978. yggR.

Phylogenomic databases

eggNOGCOG2805.
HOGENOMHOG000008425.
KOK02669.
OMASERCLIQ.
OrthoDBEOG6JMMWM.
PhylomeDBP52052.
ProtClustDBCLSK880539.

Enzyme and pathway databases

BioCycEcoCyc:G7526-MONOMER.
ECOL316407:JW2917-MONOMER.

Gene expression databases

GenevestigatorP52052.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR006321. PilT.
IPR001482. T2SS_protein-E.
[Graphical view]
PfamPF00437. T2SE. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01420. pilT_fam. 1 hit.
PROSITEPS00662. T2SP_E. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP52052.

Entry information

Entry nameYGGR_ECOLI
AccessionPrimary (citable) accession number: P52052
Secondary accession number(s): P76649, Q2M9P3
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 16, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene