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P52052

- YGGR_ECOLI

UniProt

P52052 - YGGR_ECOLI

Protein

Uncharacterized protein YggR

Gene

yggR

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 107 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi127 – 1348ATPSequence Analysis

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. nucleoside-triphosphatase activity Source: InterPro
    3. protein binding Source: IntAct

    GO - Biological processi

    1. transport Source: UniProtKB-KW

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciEcoCyc:G7526-MONOMER.
    ECOL316407:JW2917-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YggR
    Gene namesi
    Name:yggR
    Ordered Locus Names:b2950, JW2917
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG12978. yggR.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 326326Uncharacterized protein YggRPRO_0000207309Add
    BLAST

    Proteomic databases

    PaxDbiP52052.
    PRIDEiP52052.

    Expressioni

    Gene expression databases

    GenevestigatoriP52052.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    pykAP215993EBI-552531,EBI-368956

    Protein-protein interaction databases

    DIPiDIP-12193N.
    IntActiP52052. 4 interactions.
    MINTiMINT-1260255.
    STRINGi511145.b2950.

    Structurei

    3D structure databases

    ProteinModelPortaliP52052.
    SMRiP52052. Positions 1-316.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GSP E family.Curated

    Phylogenomic databases

    eggNOGiCOG2805.
    HOGENOMiHOG000008425.
    KOiK02669.
    OMAiRYRANFF.
    OrthoDBiEOG6JMMWM.
    PhylomeDBiP52052.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR003593. AAA+_ATPase.
    IPR027417. P-loop_NTPase.
    IPR006321. PilT.
    IPR001482. T2SS_protein-E.
    [Graphical view]
    PfamiPF00437. T2SE. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR01420. pilT_fam. 1 hit.
    PROSITEiPS00662. T2SP_E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P52052-1 [UniParc]FASTAAdd to Basket

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    MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD TPDVEELLRE    50
    WLDDDQRAIL LENGQLDFAV SLAENQRLRG SAFAQRHGIS LALRLLPSHC 100
    PQLEQLGAPT VLPELLKSEN GLILVTGATG SGKSTTLAAM VGYLNQHADA 150
    HILTLEDPVE YLYASQRCLI QQREIGLHCM TFASGLRAAL REDPDVILLG 200
    ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS FPAQEKDPVR 250
    NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH 300
    VIQTGQQVGM ITFQQSYQHR VGEGRL 326
    Length:326
    Mass (Da):35,994
    Last modified:October 1, 1996 - v1
    Checksum:i54FD0DD877ED18C4
    GO

    Sequence cautioni

    The sequence AAA69117.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U28377 Genomic DNA. Translation: AAA69117.1. Different initiation.
    U00096 Genomic DNA. Translation: AAC75987.2.
    AP009048 Genomic DNA. Translation: BAE77013.1.
    PIRiE65080.
    RefSeqiNP_417425.2. NC_000913.3.
    YP_491149.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75987; AAC75987; b2950.
    BAE77013; BAE77013; BAE77013.
    GeneIDi12930248.
    947430.
    KEGGiecj:Y75_p2880.
    eco:b2950.
    PATRICi32121312. VBIEscCol129921_3044.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U28377 Genomic DNA. Translation: AAA69117.1 . Different initiation.
    U00096 Genomic DNA. Translation: AAC75987.2 .
    AP009048 Genomic DNA. Translation: BAE77013.1 .
    PIRi E65080.
    RefSeqi NP_417425.2. NC_000913.3.
    YP_491149.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P52052.
    SMRi P52052. Positions 1-316.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-12193N.
    IntActi P52052. 4 interactions.
    MINTi MINT-1260255.
    STRINGi 511145.b2950.

    Proteomic databases

    PaxDbi P52052.
    PRIDEi P52052.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75987 ; AAC75987 ; b2950 .
    BAE77013 ; BAE77013 ; BAE77013 .
    GeneIDi 12930248.
    947430.
    KEGGi ecj:Y75_p2880.
    eco:b2950.
    PATRICi 32121312. VBIEscCol129921_3044.

    Organism-specific databases

    EchoBASEi EB2803.
    EcoGenei EG12978. yggR.

    Phylogenomic databases

    eggNOGi COG2805.
    HOGENOMi HOG000008425.
    KOi K02669.
    OMAi RYRANFF.
    OrthoDBi EOG6JMMWM.
    PhylomeDBi P52052.

    Enzyme and pathway databases

    BioCyci EcoCyc:G7526-MONOMER.
    ECOL316407:JW2917-MONOMER.

    Miscellaneous databases

    PROi P52052.

    Gene expression databases

    Genevestigatori P52052.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR003593. AAA+_ATPase.
    IPR027417. P-loop_NTPase.
    IPR006321. PilT.
    IPR001482. T2SS_protein-E.
    [Graphical view ]
    Pfami PF00437. T2SE. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR01420. pilT_fam. 1 hit.
    PROSITEi PS00662. T2SP_E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

    Entry informationi

    Entry nameiYGGR_ECOLI
    AccessioniPrimary (citable) accession number: P52052
    Secondary accession number(s): P76649, Q2M9P3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 107 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3