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Protein

Uncharacterized protein YggR

Gene

yggR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi127 – 1348ATPSequence Analysis

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7526-MONOMER.
ECOL316407:JW2917-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YggR
Gene namesi
Name:yggR
Ordered Locus Names:b2950, JW2917
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318 Componenti: Chromosome UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12978. yggR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 326326Uncharacterized protein YggRPRO_0000207309Add
BLAST

Proteomic databases

PaxDbiP52052.
PRIDEiP52052.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
pykAP215993EBI-552531,EBI-368956

Protein-protein interaction databases

DIPiDIP-12193N.
IntActiP52052. 4 interactions.
MINTiMINT-1260255.
STRINGi511145.b2950.

Structurei

3D structure databases

ProteinModelPortaliP52052.
SMRiP52052. Positions 1-316.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP E family.Curated

Phylogenomic databases

eggNOGiCOG2805.
HOGENOMiHOG000008425.
InParanoidiP52052.
KOiK02669.
OMAiSAFAHTR.
OrthoDBiEOG6JMMWM.
PhylomeDBiP52052.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR006321. PilT.
IPR001482. T2SS_protein-E.
[Graphical view]
PfamiPF00437. T2SE. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01420. pilT_fam. 1 hit.
PROSITEiPS00662. T2SP_E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P52052-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD TPDVEELLRE
60 70 80 90 100
WLDDDQRAIL LENGQLDFAV SLAENQRLRG SAFAQRHGIS LALRLLPSHC
110 120 130 140 150
PQLEQLGAPT VLPELLKSEN GLILVTGATG SGKSTTLAAM VGYLNQHADA
160 170 180 190 200
HILTLEDPVE YLYASQRCLI QQREIGLHCM TFASGLRAAL REDPDVILLG
210 220 230 240 250
ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS FPAQEKDPVR
260 270 280 290 300
NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH
310 320
VIQTGQQVGM ITFQQSYQHR VGEGRL
Length:326
Mass (Da):35,994
Last modified:October 1, 1996 - v1
Checksum:i54FD0DD877ED18C4
GO

Sequence cautioni

The sequence AAA69117.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69117.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75987.2.
AP009048 Genomic DNA. Translation: BAE77013.1.
PIRiE65080.
RefSeqiNP_417425.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC75987; AAC75987; b2950.
BAE77013; BAE77013; BAE77013.
GeneIDi947430.
KEGGieco:b2950.
PATRICi32121312. VBIEscCol129921_3044.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69117.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75987.2.
AP009048 Genomic DNA. Translation: BAE77013.1.
PIRiE65080.
RefSeqiNP_417425.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP52052.
SMRiP52052. Positions 1-316.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-12193N.
IntActiP52052. 4 interactions.
MINTiMINT-1260255.
STRINGi511145.b2950.

Proteomic databases

PaxDbiP52052.
PRIDEiP52052.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75987; AAC75987; b2950.
BAE77013; BAE77013; BAE77013.
GeneIDi947430.
KEGGieco:b2950.
PATRICi32121312. VBIEscCol129921_3044.

Organism-specific databases

EchoBASEiEB2803.
EcoGeneiEG12978. yggR.

Phylogenomic databases

eggNOGiCOG2805.
HOGENOMiHOG000008425.
InParanoidiP52052.
KOiK02669.
OMAiSAFAHTR.
OrthoDBiEOG6JMMWM.
PhylomeDBiP52052.

Enzyme and pathway databases

BioCyciEcoCyc:G7526-MONOMER.
ECOL316407:JW2917-MONOMER.

Miscellaneous databases

PROiP52052.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR027417. P-loop_NTPase.
IPR006321. PilT.
IPR001482. T2SS_protein-E.
[Graphical view]
PfamiPF00437. T2SE. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01420. pilT_fam. 1 hit.
PROSITEiPS00662. T2SP_E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGGR_ECOLI
AccessioniPrimary (citable) accession number: P52052
Secondary accession number(s): P76649, Q2M9P3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: July 22, 2015
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.