P51878 (CASP5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 123.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Caspase-5 Short name=CASP-5 EC=3.4.22.58 Alternative name(s): ICE(rel)-III Protease ICH-3 Protease TY Cleaved into the following 2 chains: | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 434 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | Mediator of programmed cell death (apoptosis). |
| Catalytic activity | Strict requirement for Asp at the P1 position. It has a preferred cleavage sequence of Tyr-Val-Ala-Asp-|- but also cleaves at Asp-Glu-Val-Asp-|-. |
| Subunit structure | Heterotetramer that consists of two anti-parallel arranged heterodimers, each one formed by a 20 kDa (p20) and a 10 kDa (p10) subunits. |
| Tissue specificity | Expressed in barely detectable amounts in most tissues except brain, highest levels being found in lung, liver and skeletal muscle. |
| Induction | Up-regulated by bacterial lipopolysaccharides (LPS). Ref.1 |
| Post-translational modification | The two subunits are derived from the precursor sequence by an autocatalytic mechanism. |
| Sequence similarities | Belongs to the peptidase C14A family. Contains 1 CARD domain. |
| Sequence caution | The sequence AAA75172.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence AAH74994.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence AAI13407.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence ABF47103.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAG59257.1 differs from that shown. Reason: Frameshift at position 10. The sequence CAA64450.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Apoptosis |
| Coding sequence diversity | Alternative initiation Alternative splicing Polymorphism |
| Molecular function | Hydrolase Protease Thiol protease |
| PTM | Zymogen |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | apoptotic process Traceable author statement Ref.4. Source: ProtInc cellular response to mechanical stimulusInferred from expression pattern PubMed 19593445. Source: UniProtKB proteolysisTraceable author statement Ref.4. Source: ProtInc regulation of apoptotic processInferred from electronic annotation. Source: InterPro |
| Cellular_component | NLRP1 inflammasome complex Inferred from direct assay PubMed 12191486. Source: UniProtKB |
| Molecular_function | cysteine-type endopeptidase activity Inferred from electronic annotation. Source: InterPro cysteine-type peptidase activityTraceable author statement Ref.4. Source: ProtInc |
| Complete GO annotation... | |
Alternative products
| This entry describes 6 isoforms produced by alternative splicing and alternative initiation. [Align] [Select] | ||||||
| Isoform 1 (identifier: P51878-1) Also known as: caspase-5/a; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Note: Most abundant isoform. | ||||||
| Isoform 2 (identifier: P51878-2) Also known as: Caspase-5/b; The sequence of this isoform differs from the canonical sequence as follows: 5-62: Missing. | ||||||
| Note: Most abundant isoform. | ||||||
| Isoform 3 (identifier: P51878-3) Also known as: Caspase-5/c; The sequence of this isoform differs from the canonical sequence as follows: 1-145: MAEDSGKKKR...MDQKITSVKP → MAA | ||||||
| Isoform 4 (identifier: P51878-4) Also known as: Caspase-5/e; The sequence of this isoform differs from the canonical sequence as follows: 5-62: Missing. 145-166: PLLQIEAGPPESAESTNILKLC → HLSNKKERGPQTPGSHHMQYKV 167-434: Missing. | ||||||
| Note: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. | ||||||
| Isoform 5 (identifier: P51878-5) Also known as: Caspase-5/f; The sequence of this isoform differs from the canonical sequence as follows: 1-2: MA → MAAVPRVEGVFIFLI | ||||||
| Isoform 6 (identifier: P51878-6) Also known as: Caspase-5-S; The sequence of this isoform differs from the canonical sequence as follows: 1-70: Missing. | ||||||
| Note: Produced by alternative initiation at Met-71 of isoform 1. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Propeptide | 1 – 136 | 136 | Potential | PRO_0000004604 | |||||
| Chain | 137 – 327 | 191 | Caspase-5 subunit p20 | PRO_0000004605 | |||||
| Propeptide | 328 – 346 | 19 | Potential | PRO_0000004606 | |||||
| Chain | 347 – 434 | 88 | Caspase-5 subunit p10 | PRO_0000004607 | |||||
Regions | |||||||||
| Domain | 56 – 148 | 93 | CARD | ||||||
Sites | |||||||||
| Active site | 267 | 1 | By similarity | ||||||
| Active site | 315 | 1 | |||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 145 | 145 | MAEDS…TSVKP → MAA in isoform 3. | VSP_038990 | |||||
| Alternative sequence | 1 – 70 | 70 | Missing in isoform 6. | VSP_038991 | |||||
| Alternative sequence | 1 – 2 | 2 | MA → MAAVPRVEGVFIFLI in isoform 5. | VSP_038992 | |||||
| Alternative sequence | 5 – 62 | 58 | Missing in isoform 2 and isoform 4. | VSP_038993 | |||||
| Alternative sequence | 145 – 166 | 22 | PLLQI…ILKLC → HLSNKKERGPQTPGSHHMQY KV in isoform 4. | VSP_038994 | |||||
| Alternative sequence | 167 – 434 | 268 | Missing in isoform 4. | VSP_038995 | |||||
| Natural variant | 19 | 1 | K → N. Ref.7 Corresponds to variant rs45483102 [ dbSNP | Ensembl ]. | VAR_047216 | |||||
| Natural variant | 26 | 1 | L → W. Corresponds to variant rs1792778 [ dbSNP | Ensembl ]. | VAR_047217 | |||||
| Natural variant | 29 | 1 | F → L. Ref.5 Ref.7 Corresponds to variant rs3181320 [ dbSNP | Ensembl ]. | VAR_024403 | |||||
| Natural variant | 75 | 1 | L → R. Ref.7 | VAR_054480 | |||||
| Natural variant | 106 | 1 | T → A. Ref.1 Ref.2 Ref.4 Ref.5 Ref.6 Ref.7 Ref.8 Corresponds to variant rs507879 [ dbSNP | Ensembl ]. | VAR_047218 | |||||
| Natural variant | 168 | 1 | R → H. Ref.5 Ref.7 Corresponds to variant rs3181179 [ dbSNP | Ensembl ]. | VAR_024404 | |||||
| Natural variant | 217 | 1 | V → L. Ref.5 Ref.7 Corresponds to variant rs3181326 [ dbSNP | Ensembl ]. | VAR_024405 | |||||
| Natural variant | 298 | 1 | R → H. Ref.7 | VAR_054481 | |||||
| Natural variant | 334 | 1 | L → V. Ref.1 Ref.4 Ref.5 Ref.7 Corresponds to variant rs523104 [ dbSNP | Ensembl ]. | VAR_047219 | |||||
| Natural variant | 353 | 1 | E → K. Ref.7 Corresponds to variant rs45619739 [ dbSNP | Ensembl ]. | VAR_047220 | |||||
| Natural variant | 382 | 1 | E → Q. Ref.7 Corresponds to variant rs45458695 [ dbSNP | Ensembl ]. | VAR_054482 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification of a novel exon encoding the amino-terminus of the predominant caspase-5 variants." Eckhart L., Kittel C., Gawlas S., Gruber F., Mildner M., Jilma B., Tschachler E. Biochem. Biophys. Res. Commun. 348:682-688(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2; 3; 4 AND 5), ALTERNATIVE SPLICING (ISOFORM 6), VARIANTS ALA-106 AND VAL-334, INDUCTION BY LPS. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT ALA-106. Tissue: Colon. |
| [3] | "Human chromosome 11 DNA sequence and analysis including novel gene identification." Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.-W., She X., Barlow K.F., Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E., FitzGerald M.G. Sakaki Y.Nature 440:497-500(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "Molecular cloning and pro-apoptotic activity of ICErelII and ICErelIII, members of the ICE/CED-3 family of cysteine proteases." Munday N.A., Vaillancourt J.P., Ali A., Casano F.J., Miller D.K., Molineaux S.M., Yamin T.-T., Yu V.L., Nicholson D.W. J. Biol. Chem. 270:15870-15876(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 6-434 (ISOFORM 1), VARIANTS ALA-106 AND VAL-334. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-434 (ISOFORM 1), VARIANTS LEU-29; ALA-106; HIS-168; LEU-217 AND VAL-334. Tissue: Colon. |
| [6] | "Identification of a cysteine protease closely related to interleukin-1 beta-converting enzyme." Faucheu C., Blanchet A.-M., Collard-Dutilleul V., Lalanne J.-L., Diu-Hercend A. Eur. J. Biochem. 236:207-213(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 37-434, VARIANT ALA-106. Tissue: Placenta and Spleen. |
| [7] | NIEHS SNPs program Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: PARTIAL NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS ASN-19; LEU-29; ARG-75; ALA-106; HIS-168; LEU-217; HIS-298; VAL-334; LYS-353 AND GLN-382. |
| [8] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: PARTIAL NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT ALA-106. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | DQ228672 mRNA. Translation: ABB58698.1. DQ228673 mRNA. Translation: ABB58699.1. DQ228674 mRNA. Translation: ABB58700.1. DQ228676 mRNA. Translation: ABB58702.1. DQ228677 mRNA. Translation: ABB58703.1. AK296660 mRNA. Translation: BAG59257.1. Frameshift. AP001153 Genomic DNA. No translation available. U28015 mRNA. Translation: AAA75172.1. Different initiation. BC074994 mRNA. Translation: AAH74994.1. Different initiation. BC113406 mRNA. Translation: AAI13407.1. Different initiation. X94993 mRNA. Translation: CAA64450.1. Different initiation. DQ508420 Genomic DNA. Translation: ABF47103.1. Different initiation. CH471065 Genomic DNA. Translation: EAW67054.1. |
| IPI | IPI00020978. IPI00784640. IPI00914544. IPI00914557. IPI00942522. IPI00979949. |
| PIR | B57511. |
| RefSeq | NP_001129581.1. NM_001136109.1. NP_001129582.1. NM_001136110.1. NP_001129584.1. NM_001136112.1. NP_004338.3. NM_004347.3. |
| UniGene | Hs.213327. |
3D structure databases | |
| ProteinModelPortal | P51878. |
| SMR | P51878. Positions 163-434. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P51878. 1 interaction. |
| STRING | 9606.ENSP00000376849. |
Protein family/group databases | |
| MEROPS | C14.008. |
PTM databases | |
| PhosphoSite | P51878. |
Polymorphism databases | |
| DMDM | 294862523. |
Proteomic databases | |
| PaxDb | P51878. |
| PRIDE | P51878. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000260315; ENSP00000260315; ENSG00000137757. ENST00000393141; ENSP00000376849; ENSG00000137757. ENST00000418434; ENSP00000398130; ENSG00000137757. ENST00000444749; ENSP00000388365; ENSG00000137757. ENST00000456200; ENSP00000408455; ENSG00000137757. ENST00000526056; ENSP00000436877; ENSG00000137757. ENST00000531367; ENSP00000434471; ENSG00000137757. |
| GeneID | 838. |
| KEGG | hsa:838. |
| UCSC | uc010ruz.1. human. uc010rva.1. human. uc010rvb.1. human. uc010rvc.1. human. |
Organism-specific databases | |
| CTD | 838. |
| GeneCards | GC11M104864. |
| HGNC | HGNC:1506. CASP5. |
| HPA | HPA040937. |
| MIM | 602665. gene. |
| neXtProt | NX_P51878. |
| PharmGKB | PA26089. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG326166. |
| HOVERGEN | HBG076981. |
| InParanoid | P51878. |
| KO | K04395. |
| OMA | CHLMEIF. |
Enzyme and pathway databases | |
| BRENDA | 3.4.22.58. 2681. |
| SABIO-RK | P51878. |
Gene expression databases | |
| ArrayExpress | P51878. |
| Bgee | P51878. |
| CleanEx | HS_CASP5. |
| Genevestigator | P51878. |
| GermOnline | ENSG00000137757. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.533.10. 1 hit. |
| InterPro | IPR001315. CARD. IPR017350. Caspase_IL-1_beta. IPR011029. DEATH-like_dom. IPR011600. Pept_C14_cat. IPR001309. Pept_C14_ICE_p20. IPR016129. Pept_C14_ICE_p20_AS. IPR002138. Pept_C14_p10. IPR002398. Pept_C14_p45. IPR015917. Pept_C14_p45_core. [Graphical view] |
| PANTHER | PTHR10454. PTHR10454. 1 hit. |
| Pfam | PF00619. CARD. 1 hit. PF00656. Peptidase_C14. 1 hit. [Graphical view] |
| PIRSF | PIRSF038001. Caspase_ICE. 1 hit. |
| PRINTS | PR00376. IL1BCENZYME. |
| SMART | SM00114. CARD. 1 hit. SM00115. CASc. 1 hit. [Graphical view] |
| SUPFAM | SSF47986. DEATH_like. 1 hit. |
| PROSITE | PS50209. CARD. 1 hit. PS01122. CASPASE_CYS. 1 hit. PS01121. CASPASE_HIS. 1 hit. PS50207. CASPASE_P10. 1 hit. PS50208. CASPASE_P20. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | P51878. |
| ChEMBL | CHEMBL3131. |
| GenomeRNAi | 838. |
| NextBio | 3490. |
| SOURCE | Search... |
Entry information
| Entry name | CASP5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P51878 Secondary accession number(s): B4DKP5 Q6DJV7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Peptidase families Classification of peptidase families and list of entries |
| Human chromosome 11 Human chromosome 11: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
