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P51682

- CCR5_MOUSE

UniProt

P51682 - CCR5_MOUSE

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Protein
C-C chemokine receptor type 5
Gene
Ccr5, Cmkbr5
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at transcript leveli

Functioni

Receptor for a number of inflammatory CC-chemokines including MIP-1-alpha, MIP-1-beta and RANTES and subsequently transduces a signal by increasing the intracellular calcium ion level. May play a role in the control of granulocytic lineage proliferation or differentiation By similarity.

GO - Molecular functioni

  1. C-C chemokine binding Source: BHF-UCL
  2. C-C chemokine receptor activity Source: MGI

GO - Biological processi

  1. chemokine-mediated signaling pathway Source: GOC
  2. chemotaxis Source: InterPro
  3. defense response Source: MGI
  4. immune response Source: InterPro
  5. inflammatory response Source: InterPro
  6. negative regulation of macrophage apoptotic process Source: BHF-UCL
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
C-C chemokine receptor type 5
Short name:
C-C CKR-5
Short name:
CC-CKR-5
Short name:
CCR-5
Alternative name(s):
MIP-1 alpha receptor
CD_antigen: CD195
Gene namesi
Name:Ccr5
Synonyms:Cmkbr5
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 9

Organism-specific databases

MGIiMGI:107182. Ccr5.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 3232Extracellular Reviewed prediction
Add
BLAST
Transmembranei33 – 6028Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini61 – 7010Cytoplasmic Reviewed prediction
Transmembranei71 – 9121Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini92 – 10413Extracellular Reviewed prediction
Add
BLAST
Transmembranei105 – 12622Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini127 – 14317Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei144 – 16825Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini169 – 20032Extracellular Reviewed prediction
Add
BLAST
Transmembranei201 – 22020Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini221 – 23717Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei238 – 26225Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini263 – 27917Extracellular Reviewed prediction
Add
BLAST
Transmembranei280 – 30324Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini304 – 35451Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. cell surface Source: MGI
  2. external side of plasma membrane Source: MGI
  3. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 354354C-C chemokine receptor type 5
PRO_0000069269Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi6 – 61O-linked (GalNAc...) By similarity
Modified residuei10 – 101Sulfotyrosine Reviewed prediction
Modified residuei12 – 121Sulfotyrosine Reviewed prediction
Modified residuei16 – 161Sulfotyrosine Reviewed prediction
Disulfide bondi103 ↔ 180 By similarity
Lipidationi323 – 3231S-palmitoyl cysteine By similarity
Lipidationi326 – 3261S-palmitoyl cysteine By similarity
Modified residuei338 – 3381Phosphoserine; by BARK1 By similarity
Modified residuei339 – 3391Phosphoserine; by BARK1 By similarity
Modified residuei344 – 3441Phosphoserine; by BARK1 By similarity
Modified residuei351 – 3511Phosphoserine; by BARK1 By similarity

Post-translational modificationi

Sulfated on at least 2 of the N-terminal tyrosines. Sulfation is required for efficient binding of the chemokines, CCL3 and CCL4 By similarity.
O-glycosylated, but not N-glycosylated. Ser-6 appears to be the major site. Also sialylated glycans present which contribute to chemokine binding By similarity.
Palmitoylation in the C-terminal is important for cell surface expression By similarity.
Phosphorylation on serine residues in the C-terminal is stimulated by binding CC chemokines especially by APO-RANTES By similarity.

Keywords - PTMi

Disulfide bond, Glycoprotein, Lipoprotein, Palmitate, Phosphoprotein, Sulfation

Proteomic databases

PRIDEiP51682.

PTM databases

PhosphoSiteiP51682.

Expressioni

Gene expression databases

ArrayExpressiP51682.
BgeeiP51682.
CleanExiMM_CCR5.
GenevestigatoriP51682.

Interactioni

Subunit structurei

Interacts with PRAF2. Efficient ligand binding to CCL3/MIP-1alpha and CCL4/MIP-1beta requires sulfation, O-glycosylation and sialic acid modifications. Glycosylation on Ser-6 is required for efficient binding of CCL4. Interacts with ADRBK1. Interacts with ARRB1 and ARRB2 By similarity.

Structurei

3D structure databases

ProteinModelPortaliP51682.
SMRiP51682. Positions 21-315.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG148353.
GeneTreeiENSGT00700000104407.
HOVERGENiHBG106917.
InParanoidiQ3ZAZ8.
KOiK04180.
OMAiIIFTRSQ.
OrthoDBiEOG738051.
TreeFamiTF330966.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR002240. Chemokine_CCR5.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERiPTHR24227. PTHR24227. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR01110. CHEMOKINER5.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P51682-1 [UniParc]FASTAAdd to Basket

« Hide

MDFQGSVPTY SYDIDYGMSA PCQKINVKQI AAQLLPPLYS LVFIFGFVGN    50
MMVFLILISC KKLKSVTDIY LLNLAISDLL FLLTLPFWAH YAANEWVFGN 100
IMCKVFTGLY HIGYFGGIFF IILLTIDRYL AIVHAVFALK VRTVNFGVIT 150
SVVTWAVAVF ASLPEIIFTR SQKEGFHYTC SPHFPHTQYH FWKSFQTLKM 200
VILSLILPLL VMVICYSGIL HTLFRCRNEK KRHRAVRLIF AIMIVYFLFW 250
TPYNIVLLLT TFQEFFGLNN CSSSNRLDQA MQATETLGMT HCCLNPVIYA 300
FVGEKFRSYL SVFFRKHMVK RFCKRCSIFQ QDNPDRASSV YTRSTGEHEV 350
STGL 354
Length:354
Mass (Da):40,785
Last modified:July 27, 2011 - v3
Checksum:iD91F50EC9C956795
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti11 – 111S → I.
Natural varianti97 – 971V → I.
Natural varianti109 – 1091L → V.
Natural varianti156 – 1561A → V.
Natural varianti213 – 2131V → I.
Natural varianti318 – 3181M → I.
Natural varianti337 – 3371A → V.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti3 – 31F → L in CAA63867. 1 Publication
Sequence conflicti62 – 621K → R in AAC53386. 1 Publication
Sequence conflicti66 – 661V → M in AAC53386. 1 Publication
Sequence conflicti80 – 801L → F in CAA63867. 1 Publication
Sequence conflicti145 – 1451N → I in AAB71183. 1 Publication
Sequence conflicti160 – 1601F → S in AAC53386. 1 Publication
Sequence conflicti185 – 1851P → L in AAC53386. 1 Publication
Sequence conflicti190 – 1901H → Y in AAB37273. 1 Publication
Sequence conflicti208 – 2081P → S in AAC52454. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U47036 mRNA. Translation: AAC52454.1.
X94151 mRNA. Translation: CAA63867.1.
U68565 Genomic DNA. Translation: AAB37273.1.
U83327 Genomic DNA. Translation: AAC53386.1.
AF022990 Genomic DNA. Translation: AAC53389.1.
AF019772 Genomic DNA. Translation: AAB71183.1.
D83648 mRNA. Translation: BAA12024.1.
AK141906 mRNA. Translation: BAE24879.1.
AK154595 mRNA. Translation: BAE32698.1.
AK155628 mRNA. Translation: BAE33354.1.
AK155867 mRNA. Translation: BAE33471.1.
CH466671 Genomic DNA. Translation: EDL37177.1.
BC103574 mRNA. Translation: AAI03575.1.
BC103586 mRNA. Translation: AAI03587.1.
BC103587 mRNA. Translation: AAI03588.1.
CCDSiCCDS40821.1.
RefSeqiNP_034047.2. NM_009917.5.
UniGeneiMm.14302.

Genome annotation databases

EnsembliENSMUST00000111442; ENSMUSP00000107069; ENSMUSG00000079227.
GeneIDi12774.
KEGGimmu:12774.
UCSCiuc009shd.2. mouse.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U47036 mRNA. Translation: AAC52454.1 .
X94151 mRNA. Translation: CAA63867.1 .
U68565 Genomic DNA. Translation: AAB37273.1 .
U83327 Genomic DNA. Translation: AAC53386.1 .
AF022990 Genomic DNA. Translation: AAC53389.1 .
AF019772 Genomic DNA. Translation: AAB71183.1 .
D83648 mRNA. Translation: BAA12024.1 .
AK141906 mRNA. Translation: BAE24879.1 .
AK154595 mRNA. Translation: BAE32698.1 .
AK155628 mRNA. Translation: BAE33354.1 .
AK155867 mRNA. Translation: BAE33471.1 .
CH466671 Genomic DNA. Translation: EDL37177.1 .
BC103574 mRNA. Translation: AAI03575.1 .
BC103586 mRNA. Translation: AAI03587.1 .
BC103587 mRNA. Translation: AAI03588.1 .
CCDSi CCDS40821.1.
RefSeqi NP_034047.2. NM_009917.5.
UniGenei Mm.14302.

3D structure databases

ProteinModelPortali P51682.
SMRi P51682. Positions 21-315.
ModBasei Search...
MobiDBi Search...

Chemistry

BindingDBi P51682.
ChEMBLi CHEMBL3676.
GuidetoPHARMACOLOGYi 62.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei P51682.

Proteomic databases

PRIDEi P51682.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000111442 ; ENSMUSP00000107069 ; ENSMUSG00000079227 .
GeneIDi 12774.
KEGGi mmu:12774.
UCSCi uc009shd.2. mouse.

Organism-specific databases

CTDi 1234.
MGIi MGI:107182. Ccr5.

Phylogenomic databases

eggNOGi NOG148353.
GeneTreei ENSGT00700000104407.
HOVERGENi HBG106917.
InParanoidi Q3ZAZ8.
KOi K04180.
OMAi IIFTRSQ.
OrthoDBi EOG738051.
TreeFami TF330966.

Miscellaneous databases

NextBioi 282158.
PROi P51682.
SOURCEi Search...

Gene expression databases

ArrayExpressi P51682.
Bgeei P51682.
CleanExi MM_CCR5.
Genevestigatori P51682.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR002240. Chemokine_CCR5.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
PANTHERi PTHR24227. PTHR24227. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00657. CCCHEMOKINER.
PR01110. CHEMOKINER5.
PR00237. GPCRRHODOPSN.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and functional expression of murine JE (monocyte chemoattractant protein 1) and murine macrophage inflammatory protein 1alpha receptors: evidence for two closely linked C-C chemokine receptors on chromosome 9."
    Boring L., Gosling J., Monteclaro F.S., Lusis A.J., Tsou C.-L., Charo I.F.
    J. Biol. Chem. 271:7551-7558(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: 129/SvJ.
    Tissue: Spleen.
  2. "Cloning and characterization of a novel murine macrophage inflammatory protein-1 alpha receptor."
    Meyer A., Coyle A.J., Proudfoot A.E.I., Wells T.N.C., Power C.A.
    J. Biol. Chem. 271:14445-14451(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6 X CBA.
    Tissue: Thymus.
  3. Kuziel W.A., Beck M.A., Dawson T.C., Maeda N.
    Submitted (DEC-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 129/Ola.
  4. "Polymorphisms in the CCR5 genes of African green monkeys and mice implicate specific amino acids in infections by simian and human immunodeficiency viruses."
    Kuhmann S.E., Platt E.J., Kozak S.L., Kabat D.
    J. Virol. 71:8642-8656(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: C57BL/6 and NIH Swiss.
    Tissue: Kidney, Liver and Spleen.
  5. "Two distinct CCR5 domains can mediate coreceptor usage by human immunodeficiency virus type 1."
    Doranz B.J., Lu Z.H., Rucker J., Zhang T.Y., Sharron M., Cen Y.H., Wang Z.X., Guo H.H., Du J.G., Accavitti M.A., Doms R.W., Peiper S.C.
    J. Virol. 71:6305-6314(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 129.
  6. Guo B., Kuno K., Harada A., Matsushima K.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  7. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J and NOD.
    Tissue: Spinal ganglion.
  8. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  9. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiCCR5_MOUSE
AccessioniPrimary (citable) accession number: P51682
Secondary accession number(s): O35313
, O35891, P97308, P97405, Q3ZAZ8, Q61867
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 126 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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